Gene
| Gene Model ID | pfu_aug1.0_13785.1_68679 |
|---|---|
| Locus | scaffold13785.1 : 11801 ... 22629 : - |
| To GenomeBrowser | scaffold13785.1:11801..22629 |
| Genes list of scaffold | scaffold13785.1 |
| Synonym | pfu_aug2.0_77.1_23382 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13785.1_68679.t1 | 2 | 1 | Ras | 1 | 22 | 6.6e-12 | 45.1 | 7.5e-09 | 0.00011 | 21.6 |
| pfu_aug1.0_13785.1_68679.t1 | 2 | 2 | Ras | 20 | 52 | 6.6e-12 | 45.1 | 5.6e-10 | 8.4e-06 | 25.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13785.1_68679.t1 | gi|119598048|gb|EAW77642.1| | RAB8B, member RAS oncogene family, isoform CRA_b [Homo sapiens] | 3.0e-24 |
Transcript
| Transcript ID | pfu_aug1.0_13785.1_68679.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13785.1_68679.t1 ggacacagcaggacaggaaaggtttcgcacaatcacaacagcctactaccgtggggctatgcttgcaatagaacatggta ttaagtttatggagactagtgctaaggctagcatcaatgttgaagaagcatttttcacactggccagagatatcaaggca aagatggataaaaaacttgaaaattcaaatgtacaaagtaaaggtagtggtggacagcaattgacaaataaacctccagc caaaaaatcaggttggaggtgtacaatcctgtga |
|
Protein
| Protein ID | pfu_aug1.0_13785.1_68679.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13785.1_68679.t1 DTAGQERFRTITTAYYRGAMLAIEHGIKFMETSAKASINVEEAFFTLARDIKAKMDKKLENSNVQSKGSGGQQLTNKPPA KKSGWRCTIL |
|