Gene
| Gene Model ID | pfu_aug1.0_13827.1_68682 |
|---|---|
| Locus | scaffold13827.1 : 3986 ... 11651 : + |
| To GenomeBrowser | scaffold13827.1:3986..11651 |
| Genes list of scaffold | scaffold13827.1 |
| Synonym | pfu_aug2.0_197.1_23646 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13827.1_68682.t1 | 1 | 1 | Ras | 18 | 97 | 1.0e-23 | 83.4 | 1.7e-27 | 1.3e-23 | 83.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13827.1_68682.t1 | gi|126697336|gb|ABO26625.1| | Ras-related protein Rab-1A [Haliotis discus discus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 2 |
Transcript
| Transcript ID | pfu_aug1.0_13827.1_68682.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13827.1_68682.t1 atgggaatttcccgtagacattttattttttcatattgcagtttgaaggcagctgatagggaatctttcaccaatgtaaa gcagtggttacaggaaattgatcggtatgccagtgaaaatgtaaataaacttttagtgggaaataagtcagacatggata tgaagaaggtggtagattacactacagcaaaggaatttgcagacagtttaggaatcccatttctagaaacaagtgcaaag aatgctacaaatgtggaacaagcttttatgacaatggctgccgagattaagaacagaatgggacccgtcacagcatcaca agacaacaaacccagtgttaaaatcaatgctagtacgcccgtcaagcaatcgggagggtgctgctaa |
|
Protein
| Protein ID | pfu_aug1.0_13827.1_68682.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13827.1_68682.t1 MGISRRHFIFSYCSLKAADRESFTNVKQWLQEIDRYASENVNKLLVGNKSDMDMKKVVDYTTAKEFADSLGIPFLETSAK NATNVEQAFMTMAAEIKNRMGPVTASQDNKPSVKINASTPVKQSGGCC |
|