Gene
| Gene Model ID | pfu_aug1.0_1386.1_29710 |
|---|---|
| Locus | scaffold1386.1 : 86626 ... 121286 : + |
| To GenomeBrowser | scaffold1386.1:86626..121286 |
| Genes list of scaffold | scaffold1386.1 |
| Synonym | pfu_aug2.0_193.1_10421 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1386.1_29710.t1 | 7 | 1 | fn3 | 26 | 83 | 0.0 | 266.8 | 4.4e-08 | 9.3e-05 | 22.4 |
| pfu_aug1.0_1386.1_29710.t1 | 5 | 1 | Interfer-bind | 29 | 74 | 2.2e-09 | 37.2 | 0.0074 | 16.0 | 5.6 |
| pfu_aug1.0_1386.1_29710.t1 | 7 | 2 | fn3 | 98 | 186 | 0.0 | 266.8 | 9.9e-17 | 2.1e-13 | 50.2 |
| pfu_aug1.0_1386.1_29710.t1 | 7 | 3 | fn3 | 200 | 290 | 0.0 | 266.8 | 4.5e-16 | 9.5e-13 | 48.0 |
| pfu_aug1.0_1386.1_29710.t1 | 5 | 2 | Interfer-bind | 201 | 292 | 2.2e-09 | 37.2 | 3.1e-05 | 0.065 | 13.2 |
| pfu_aug1.0_1386.1_29710.t1 | 7 | 4 | fn3 | 305 | 385 | 0.0 | 266.8 | 2.1e-12 | 4.5e-09 | 36.3 |
| pfu_aug1.0_1386.1_29710.t1 | 7 | 5 | fn3 | 415 | 489 | 0.0 | 266.8 | 1.1e-13 | 2.3e-10 | 40.4 |
| pfu_aug1.0_1386.1_29710.t1 | 5 | 3 | Interfer-bind | 437 | 484 | 2.2e-09 | 37.2 | 0.039 | 83.0 | 3.2 |
| pfu_aug1.0_1386.1_29710.t1 | 7 | 6 | fn3 | 502 | 585 | 0.0 | 266.8 | 4.1e-13 | 8.7e-10 | 38.6 |
| pfu_aug1.0_1386.1_29710.t1 | 5 | 4 | Interfer-bind | 551 | 584 | 2.2e-09 | 37.2 | 0.009 | 19.0 | 5.3 |
| pfu_aug1.0_1386.1_29710.t1 | 7 | 7 | fn3 | 603 | 691 | 0.0 | 266.8 | 3.9e-11 | 8.3e-08 | 32.2 |
| pfu_aug1.0_1386.1_29710.t1 | 5 | 5 | Interfer-bind | 654 | 684 | 2.2e-09 | 37.2 | 0.22 | 460.0 | 0.8 |
| pfu_aug1.0_1386.1_29710.t1 | 5 | 1 | Y_phosphatase | 907 | 1001 | 0.0 | 424.3 | 2.8e-24 | 6.0e-21 | 74.8 |
| pfu_aug1.0_1386.1_29710.t1 | 5 | 2 | Y_phosphatase | 1088 | 1168 | 0.0 | 424.3 | 2.0e-33 | 4.3e-30 | 104.7 |
| pfu_aug1.0_1386.1_29710.t1 | 5 | 3 | Y_phosphatase | 1168 | 1225 | 0.0 | 424.3 | 8.2e-21 | 1.7e-17 | 63.5 |
| pfu_aug1.0_1386.1_29710.t1 | 5 | 4 | Y_phosphatase | 1283 | 1320 | 0.0 | 424.3 | 9.3e-08 | 0.0002 | 20.8 |
| pfu_aug1.0_1386.1_29710.t1 | 5 | 5 | Y_phosphatase | 1321 | 1471 | 0.0 | 424.3 | 0.0 | 0.0 | 158.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1386.1_29710.t1 | gi|351708605|gb|EHB11524.1| | Receptor-type tyrosine-protein phosphatase delta [Heterocephalus glaber] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1386.1_29710.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1386.1_29710.t1 atgataacgacaaataaactcgaaatcaacattcgttttaaacaggttttactgtacatttacgtcatagttcgtttgaa aggatacaaagtgttttacactctaaaagcagatttaccaatcatactgtggcgcactacggaagtgtcatcaaaccaaa aaatagcgaccatagaaaatctgaaaaccaacgagacttacactatgtgtgtactggcatactccagtaaaggggagggg ccagtatcgaacctgatccaggtcatcacacagccaggaatacccagtgcagcaccccaggcagttagcggattgccaaa agactcccgcagtatcatagtgacatggaaacctccaccccccaacaaacaaaacggagccatcactggctataagatat tctatgtgaagtcagatgatggccttactgatgacgatgcagatacaagttctgtagatgaacaagctcgagaaattctc ctgggaggactgtccgtttatacaaagtataaaatatgggtgctggcttacacaactgtaggagacggcccaaagtctga ccccatttatgtatggacagacgaggatgtccctggtgaacctaagaaggtgaaagtggatgccatcaattctacagcac tgtatgtcgagtggcggcccccagaggctcgaaatacaaacggcatcatccgaggctattacgtgtactacgtagaggtc acagagaatggggatgttaggggtcaagaacgtgtagaagacactggcgatggcaatattaatgaagaagtcataacggg actgaaagctgagactcgctatcatgtttctgtagcaggctacacaaggaaaggagacggaaagagaagcaaaacaaagt ttgtcaaaacgagcagagctgtgcctacgcctcctcgtaatttgaaccttgagcttcttcacgatgatcctccccaagta caggtgacatggcagaagccagctaaggttcacggtaacctggagggatacagaattatatggggacggaaaagtgaaaa ctatcagatgctcaatctccctcccatgagacagtcctatatatctgatgtcttggacaaaggtgctacgtatgaattcc gagtcctggccaagaatgaagtaggagtaggagaaatagcttctatgaatatagccacgcccgatggaggtaagaatgat gttgcatggatgagtttatatgtttctgtcataaccgcagggctgtctgaaactagtgttcgtttggagtgggatctacc tgctaaacatctacaaaacggagaaattatcatgtatcaactactataccataaaatggccaaccaaatcattgtggacg agcagaacctgaccagtcttcaatacgatttgaccggactggaaatgaacacagactatgtgttccagatccgagcattc acaagtaaaggctccggaccctggagtcaaaggctcttgttccatacatttggaagaatgccaccagctcctaagaatgt ccaagtacgtcgctcctctgcacgtgttattgaagtaacctgggacgagcctaaaatcccagtggcaggatacagaattt attataatatttttgccgtggaacaaatggagctttgggataagttggacataggaccatacacagtggctgatatccta aacctggaaccaaaacaagcatacgctgtacgtgtgcaagccaaatctgtggacggaagatttgggaatttctccgacat aattgtgtctgattttctaccacttgactctgaacggtttgatgttgtcagcaatttccgagtcgccctaaaaacatcaa gggacataactctggcctgggatccaccaactaagtcaaatgtccaggtttacatgctgaagtatgctggcacaacattt ttccgtgagagaaatagagttttgccacgtaatgaagctcctaaacaggaagacattcctggtgatgccaccaactataa ggttatggacctaaaacctgttacccgctacgtcttcaacatcagcgctcagttcagagacggctctgtgggaccattta tctcccttacatctcaaactcgattagaacccccacccatagtttttgcccccactgtgagtaaggtatctaacaaagga gtatatctgaatctgaaaacctcctccgatgaatttggtggcctcagttactacttcttggtggttgtgccccagcagaa cttcactattaaagaccctaaggactttaaggaaagtgattttttctcggaccagttctccaatgacatgcctgcacgtc aggtttatatagcagctaagtttgatgcacagcgactaccgaaccagttcctgctcggtgatcttggagattacggaggc tttacaaaccgacctcttgaccctgatttcctgtacaaagtattcctcagagtttacactgtcaataaggctgtatacaa atccagtgactattcagaaatagtgcgccccagaacaatacatggggttcgtccgtatccgcctccaccccaagttcctg acggtgggccacgggggcgtgatcagaagtccagtactgatgaggaagtggaccaggttaaggaggatgtcagcaactct cgtagcctgatgattatcatgattgtggcccctgtttgtataggcgtggcacttattatcatcggctgtatattacttat aaaatgtgaccagtactggccccatcgtggaacagagacgtacggactgatgcaggtgttactgatggatgttacagaac tctccacttacaccatcagaactttccacattaccaggtacggaatgaatgagaagagagaggtgcgtcagttccagttt actgcatggcctgaccatggggtgcctgatcaccctacccccttacttatgtttatgaggcgtgtcaaatcaagtaaccc accagatgctggaccaatgatctgtcattgcagacgttcacgtaacaggaagcagaaaaatcccgagcccttaccaggga aagtatttgttgatgtaccaccacatccatctgatcctgtagaactacgtcgtcagcattatcagactccaggaatgatg agccatccgccaataccgattcatatgctacaggagcacattgataatctcaaaaacaacgacaatctgaaattctctca agagtatgagtccatcgaacccggacaacagttcacatgggataactcaaattacgagataaacaaacctaaaaatagat atgccaatgtcatagcctacgatcattcgagggtaattcttcaaccaatcgagggtattcctggaagcgactacactaat gctaactatatggatggttataggaaacaaaatgcatacatagccacccagggacctctgccagaaacattcggagattt ctggagaatgatctgggaacagagatgtgctaccattgtcatgatgaccagattagaagaaagtgctggagtaggtagaa ctggtgctttcatcgttatagatgctatgttagagagaatcaagcatgagaaaaccgtggacatatatggtcatgtgacg tgtctgagggcacagcgtaactacatggtgcaaactgaggaccaatacatcttcatccatgacgctttgttggaggctgt aacatgtggtaacacggaggtcccggctagaagcctctctatacacatacagaaactaatgcagcccgagccaggtgaaa ccgtcactggcatggagctggaattcaagcgtttagccaatatgaaggccagtcctaacagatttgtcagtgcaaacctg cctgtcaacaagttcaagaacagacttgtcaatatactcccatttgagtcaactcgagttgcactacagccaattcgtgg tgtggacggttcagactatattaatgccagcttcatagatgagaagtgccatcagtactggccgagtgagagatctgcta gataccagtactttgtggtggatcccatggcggaatataatatgccacagtacatactgagagagttcaaggtcactgac gctagggatggtcaatcacggacaattcgtcagttccagtttacagactggcctgagcagggggtacccaaatctgggga gggattcatagatttcattggacaagttcataaaacaaaggagcagtttggacaagaaggaccaatcacagttcactgca gtgctggagtgggtagaacaggtgtatttgtgactttaagtatcgtgttagaaagaatgcgatatgaaggtgttgttgac atgttccaaacggttaaaatgctcaggacacaacgtccagccatggtgcaaacagaggaccagtatcaattctgttaccg agctgctttagaatatctaggatcatttgaccactatgcaacgtag |
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Protein
| Protein ID | pfu_aug1.0_1386.1_29710.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1386.1_29710.t1 MITTNKLEINIRFKQVLLYIYVIVRLKGYKVFYTLKADLPIILWRTTEVSSNQKIATIENLKTNETYTMCVLAYSSKGEG PVSNLIQVITQPGIPSAAPQAVSGLPKDSRSIIVTWKPPPPNKQNGAITGYKIFYVKSDDGLTDDDADTSSVDEQAREIL LGGLSVYTKYKIWVLAYTTVGDGPKSDPIYVWTDEDVPGEPKKVKVDAINSTALYVEWRPPEARNTNGIIRGYYVYYVEV TENGDVRGQERVEDTGDGNINEEVITGLKAETRYHVSVAGYTRKGDGKRSKTKFVKTSRAVPTPPRNLNLELLHDDPPQV QVTWQKPAKVHGNLEGYRIIWGRKSENYQMLNLPPMRQSYISDVLDKGATYEFRVLAKNEVGVGEIASMNIATPDGGKND VAWMSLYVSVITAGLSETSVRLEWDLPAKHLQNGEIIMYQLLYHKMANQIIVDEQNLTSLQYDLTGLEMNTDYVFQIRAF TSKGSGPWSQRLLFHTFGRMPPAPKNVQVRRSSARVIEVTWDEPKIPVAGYRIYYNIFAVEQMELWDKLDIGPYTVADIL NLEPKQAYAVRVQAKSVDGRFGNFSDIIVSDFLPLDSERFDVVSNFRVALKTSRDITLAWDPPTKSNVQVYMLKYAGTTF FRERNRVLPRNEAPKQEDIPGDATNYKVMDLKPVTRYVFNISAQFRDGSVGPFISLTSQTRLEPPPIVFAPTVSKVSNKG VYLNLKTSSDEFGGLSYYFLVVVPQQNFTIKDPKDFKESDFFSDQFSNDMPARQVYIAAKFDAQRLPNQFLLGDLGDYGG FTNRPLDPDFLYKVFLRVYTVNKAVYKSSDYSEIVRPRTIHGVRPYPPPPQVPDGGPRGRDQKSSTDEEVDQVKEDVSNS RSLMIIMIVAPVCIGVALIIIGCILLIKCDQYWPHRGTETYGLMQVLLMDVTELSTYTIRTFHITRYGMNEKREVRQFQF TAWPDHGVPDHPTPLLMFMRRVKSSNPPDAGPMICHCRRSRNRKQKNPEPLPGKVFVDVPPHPSDPVELRRQHYQTPGMM SHPPIPIHMLQEHIDNLKNNDNLKFSQEYESIEPGQQFTWDNSNYEINKPKNRYANVIAYDHSRVILQPIEGIPGSDYTN ANYMDGYRKQNAYIATQGPLPETFGDFWRMIWEQRCATIVMMTRLEESAGVGRTGAFIVIDAMLERIKHEKTVDIYGHVT CLRAQRNYMVQTEDQYIFIHDALLEAVTCGNTEVPARSLSIHIQKLMQPEPGETVTGMELEFKRLANMKASPNRFVSANL PVNKFKNRLVNILPFESTRVALQPIRGVDGSDYINASFIDEKCHQYWPSERSARYQYFVVDPMAEYNMPQYILREFKVTD ARDGQSRTIRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQEGPITVHCSAGVGRTGVFVTLSIVLERMRYEGVVD MFQTVKMLRTQRPAMVQTEDQYQFCYRAALEYLGSFDHYAT |
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