Gene
| Gene Model ID | pfu_aug1.0_1389.1_07928 |
|---|---|
| Locus | scaffold1389.1 : 30066 ... 46136 : + |
| To GenomeBrowser | scaffold1389.1:30066..46136 |
| Genes list of scaffold | scaffold1389.1 |
| Synonym | pfu_aug2.0_1562.1_08444 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1389.1_07928.t1 | 1 | 1 | GCFC | 8 | 218 | 3.4e-34 | 118.4 | 1.4e-37 | 1.1e-33 | 116.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1389.1_07928.t1 | gi|327268595|ref|XP_003219082.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1389.1_07928.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1389.1_07928.t1 atggaggactttagtcaggtacagtctgtacgagagagattcgaggactggaagtacaagtacggagagacatacaaaga ggcgtacatcggactgtgtctacccaaactctataatccctatgtccggatgcagctcatacaatggaatccacttgagg cacatagcagagactttgaggaaactagttggtttgaaactctggtattttatggttttaaacgagaagacaccataagt aaacaggatgatgatgtaaggttattaccaggcattgtagagaaagtattacttccgagactcacaacaattgcagagac gatatgggatcctttatcaacaactcagactgcccgactggttaacaccttacagaaaatcatcaaagattaccccacca ttcacgctgaaagcaaaaacactcagactctccttcatgccattgccaaacgaatgcagaaaacattagatgacgatgtg ttcatgccactttatccaaaatctgttattgagaatcgttcatcgggttcttcagttttctttcatcgacagctgtggac ctgcattaagttacttggaaacgttctcagctggaacggaattttggcatccagtgttctccatggtttggctctagacg gtctacttaatcgttacgtcatattaggtctctgtaactctgtactcaacagagaaactctgcagaaatgtcaatccatt atatcaacatttccaaaggaatggttctcagacctggatgatgataaaaccatgccacaaatggagaacctagccaagta tctggtgtcggcagcaaacacaatattcaacgaaacattaccatgtaaacggaaatctctaatgaatggaggtacgaaaa ttttgcaatccggcagtgaccttaaatag |
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Protein
| Protein ID | pfu_aug1.0_1389.1_07928.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1389.1_07928.t1 MEDFSQVQSVRERFEDWKYKYGETYKEAYIGLCLPKLYNPYVRMQLIQWNPLEAHSRDFEETSWFETLVFYGFKREDTIS KQDDDVRLLPGIVEKVLLPRLTTIAETIWDPLSTTQTARLVNTLQKIIKDYPTIHAESKNTQTLLHAIAKRMQKTLDDDV FMPLYPKSVIENRSSGSSVFFHRQLWTCIKLLGNVLSWNGILASSVLHGLALDGLLNRYVILGLCNSVLNRETLQKCQSI ISTFPKEWFSDLDDDKTMPQMENLAKYLVSAANTIFNETLPCKRKSLMNGGTKILQSGSDLK |
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