Gene
| Gene Model ID | pfu_aug1.0_13919.1_18060 |
|---|---|
| Locus | scaffold13919.1 : 1 ... 4175 : - |
| To GenomeBrowser | scaffold13919.1:1..4175 |
| Genes list of scaffold | scaffold13919.1 |
| Synonym | NA |
Manual annotation
| Study field | structural proteins |
|---|---|
| Gene name | paramyosin |
| Description | Paramyosin partial sequence. BLSTP top hit to AB016070 (Mytilus galloprovincialis). |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13919.1_18060.t1 | 2 | 1 | Myosin_tail_1 | 15 | 67 | 0.0 | 192.7 | 9.1e-16 | 4.6e-13 | 47.8 |
| pfu_aug1.0_13919.1_18060.t1 | 3 | 1 | Filament | 15 | 83 | 4.0e-07 | 29.8 | 0.0019 | 0.97 | 8.8 |
| pfu_aug1.0_13919.1_18060.t1 | 2 | 2 | Myosin_tail_1 | 62 | 264 | 0.0 | 192.7 | 0.0 | 8.40779e-45 | 152.8 |
| pfu_aug1.0_13919.1_18060.t1 | 3 | 2 | Filament | 78 | 164 | 4.0e-07 | 29.8 | 0.0026 | 1.3 | 8.3 |
| pfu_aug1.0_13919.1_18060.t1 | 3 | 3 | Filament | 170 | 257 | 4.0e-07 | 29.8 | 1.2e-07 | 6.2e-05 | 22.6 |
Transcript
| Transcript ID | pfu_aug1.0_13919.1_18060.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13919.1_18060.t1 atggtacggtttgataataataataatactttcaatttacagttcgagaagcagtccgccgagctgaccttccaattaga tcagttgcaagacagacttgaggaggccaccggaacgtcatctgctcagctggacatcaacaggaagagggagtctgaga tcactaagctccgtaaagatctagagttggccaatgcccagcgtaaattgagtgtgagaatccaggaattagaagatctt ctagaacaacagagaattagatgcagcaaccttgagaaagccaaatccaaactcacagctgaactcaaggaagtcaccat cgaactcgaaaactgccagatcatcatccaagatctcaccaagaggaacaggcagcttgagaacgagaacgccaacctac agaagagagttgatgaactgtctgctgagaatgccggtctccgtgctgataaggcagccctagaacaggagaaccacagg ctgaaggtctccaacgctgaactgatggagaagaacgacaacctccagagagaaaacaacaatctcaatgcccaacttcg tgaggccaatcaagctctgaaggatgccaacagacagattaatgaactcagtgcagctaaggccgcccttgaggccgagc gtgacgcccttgcgtcagccctccgtgacaccgaagatgccctcaaggacgcagagaacaaacttgccgccgcccaggct gctcttaaccagctcagagccgaaatggaacagagactacgcgaaaaggatgaagaaattgacgccatcaggttagcagt gatagtataa |
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Protein
| Protein ID | pfu_aug1.0_13919.1_18060.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13919.1_18060.t1 MVRFDNNNNTFNLQFEKQSAELTFQLDQLQDRLEEATGTSSAQLDINRKRESEITKLRKDLELANAQRKLSVRIQELEDL LEQQRIRCSNLEKAKSKLTAELKEVTIELENCQIIIQDLTKRNRQLENENANLQKRVDELSAENAGLRADKAALEQENHR LKVSNAELMEKNDNLQRENNNLNAQLREANQALKDANRQINELSAAKAALEAERDALASALRDTEDALKDAENKLAAAQA ALNQLRAEMEQRLREKDEEIDAIRLAVIV |
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