Gene
| Gene Model ID | pfu_aug1.0_13943.1_68696 |
|---|---|
| Locus | scaffold13943.1 : 6829 ... 13659 : - |
| To GenomeBrowser | scaffold13943.1:6829..13659 |
| Genes list of scaffold | scaffold13943.1 |
| Synonym | pfu_aug2.0_517.1_24129 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13943.1_68696.t1 | 1 | 1 | PIG-U | 37 | 241 | 2.6e-18 | 66.0 | 6.8e-22 | 3.3e-18 | 65.6 |
| pfu_aug1.0_13943.1_68696.t1 | 1 | 1 | DUF2029 | 50 | 213 | 5.9e-10 | 39.0 | 1.8e-13 | 8.8e-10 | 38.4 |
| pfu_aug1.0_13943.1_68696.t1 | 1 | 1 | Mannosyl_trans | 116 | 251 | 9.4e-38 | 130.3 | 2.59997e-41 | 1.3e-37 | 129.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_13943.1_68696.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13943.1_68696.t1 gactacttgatgttcacgctcctcatagcagcactgtgccgacttcattggggactggggttggacgtaacagacattga ctataaagtctttactgatgctgcagactacatggttagggatgaatcaccgtacctcagacccacatatcgttatacac caatcatagcctggatgctgcagccaaacatcacccttaaccccgccttcggcaagcttctatttatagtctttgacatt atatctggataccttacctacgccatgctgataagacaaggtaccactaaaagccgagccttgctaagtgcatctttctg gctcctgaatcctttacctatcggtgtgtcgggacgagggaatgcagagtccttcttgtctttgttagttctactcacgt tcaaattccacatcgagagaaggccaattttatcagcgattttgtatggtctagcagtgcatatcaaaatatacccagtg atctatgctctaccattatatctcaatattgactcaaagactgatgatggacgaagatctcttagagacagacttctacc tacagttaacagagtgagatatttcatcgtagctgcagcagttttcattgccctgacctcttatttctatcatttttatg gctgggactttttggaaaacacatacctgtatcatgtcaccagaaaggacaccaagcacaacttctccgtttatttttac ctattgcggtatggggtatcccagcgtcgttgttggagtttgaagggatggacacatactttttcatctggatag |
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Protein
| Protein ID | pfu_aug1.0_13943.1_68696.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13943.1_68696.t1 DYLMFTLLIAALCRLHWGLGLDVTDIDYKVFTDAADYMVRDESPYLRPTYRYTPIIAWMLQPNITLNPAFGKLLFIVFDI ISGYLTYAMLIRQGTTKSRALLSASFWLLNPLPIGVSGRGNAESFLSLLVLLTFKFHIERRPILSAILYGLAVHIKIYPV IYALPLYLNIDSKTDDGRRSLRDRLLPTVNRVRYFIVAAAVFIALTSYFYHFYGWDFLENTYLYHVTRKDTKHNFSVYFY LLRYGVSQRRCWSLKGWTHTFSSG |
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