Gene
| Gene Model ID | pfu_aug1.0_13989.1_32380 |
|---|---|
| Locus | scaffold13989.1 : 23812 ... 30734 : - |
| To GenomeBrowser | scaffold13989.1:23812..30734 |
| Genes list of scaffold | scaffold13989.1 |
| Synonym | NA |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | Chitinase-like protein |
| Description | Family 18 chitinase, best hit to BLAST CCE46155.1 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13989.1_32380.t1 | 2 | 1 | Glyco_hydro_18 | 3 | 183 | 0.0 | 179.1 | 3.20001e-40 | 2.4e-36 | 125.9 |
| pfu_aug1.0_13989.1_32380.t1 | 2 | 2 | Glyco_hydro_18 | 230 | 286 | 0.0 | 179.1 | 1.9e-17 | 1.4e-13 | 50.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13989.1_32380.t1 | gi|92110436|emb|CAI96028.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13989.1_32380.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13989.1_32380.t1 gattcaatagattttgttactacaatggttgggctctatacagagacaatgaccatgccttgctcccagagaaaatcgac gccttcctctgtacacatcttgtatttgccttcggagccatagacgaatcgggcaccagaatatatgtccccgaggtgtt tgaggacatgcatttattcgaaagaatgaatgagcttagacaccgtaatgaagacctgaatttagttctatctgttggtg gatgggacatgggcagtgaagcgtggagtgaagtcttagcatccaaagacaacatgcagacatttgttaaagaagccatt gtgtatctgaggctacatgactttgatgggatagaccttgactgggagtatcctaccttcagaggaagcaaaccaattga tagggagagattttcacaactgatagagatattccgccatgaaatggatatagaagagacccctgatgacaagtgggact tgtgtctgtctgtagctgtagatccatcagaatacatgagctcaagttcctacgaaattgacaaaattacgagaatttat catttggctccagctgcaaaacttaaactctttattttcctagaaagcattagagaacagctcagccaaacgccaccatc ggtgatccggcgcttggtcctggatcggatgggggaattgatttgtcatctggttcgaggtggaacaaaagaatactatc tgaaagaagaaaatgttccatttattgtgaatggcgatgagtgggttggctttgataatcctcgcagtgtaagggaaaag gctgccctggtgaagaataacagactaggaggagtcatggtgtgggcaatagacatggacgatcattcagggtggtgtgg agagaagttccccctcatgatgtccatcatccacggccttggggaatttgtagattacatgtccgatacactggaagcag aaagagaaatgatcaacaagaaaatacggaaagctgcacgtgaaatatcctattattcagataaagggaacttcacaatg gcaaagaaaatggagaataagttgaatcatttgaaggatcatctatctacagttcaggcccatcagtcagtccaatgggc aaacgttcaatatagtgcaggccttggaggtaaaccgttaccaagtaaagatactccatcctggtcatggtag |
|
Protein
| Protein ID | pfu_aug1.0_13989.1_32380.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13989.1_32380.t1 FNRFCYYNGWALYRDNDHALLPEKIDAFLCTHLVFAFGAIDESGTRIYVPEVFEDMHLFERMNELRHRNEDLNLVLSVGG WDMGSEAWSEVLASKDNMQTFVKEAIVYLRLHDFDGIDLDWEYPTFRGSKPIDRERFSQLIEIFRHEMDIEETPDDKWDL CLSVAVDPSEYMSSSSYEIDKITRIYHLAPAAKLKLFIFLESIREQLSQTPPSVIRRLVLDRMGELICHLVRGGTKEYYL KEENVPFIVNGDEWVGFDNPRSVREKAALVKNNRLGGVMVWAIDMDDHSGWCGEKFPLMMSIIHGLGEFVDYMSDTLEAE REMINKKIRKAAREISYYSDKGNFTMAKKMENKLNHLKDHLSTVQAHQSVQWANVQYSAGLGGKPLPSKDTPSWSW |
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