Gene
| Gene Model ID | pfu_aug1.0_140.1_50671 |
|---|---|
| Locus | scaffold140.1 : 60146 ... 95233 : + |
| To GenomeBrowser | scaffold140.1:60146..95233 |
| Genes list of scaffold | scaffold140.1 |
| Synonym | pfu_aug2.0_1192.1_08230 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_140.1_50671.t1 | 5 | 1 | DHC_N2 | 149 | 174 | 0.0 | 234.5 | 0.64 | 2400.0 | -3.3 |
| pfu_aug1.0_140.1_50671.t1 | 6 | 1 | DHC_N1 | 198 | 386 | 1.4013e-45 | 155.2 | 4.4e-38 | 1.6e-34 | 119.2 |
| pfu_aug1.0_140.1_50671.t1 | 5 | 2 | DHC_N2 | 277 | 303 | 0.0 | 234.5 | 0.43 | 1600.0 | -2.8 |
| pfu_aug1.0_140.1_50671.t1 | 6 | 2 | DHC_N1 | 518 | 557 | 1.4013e-45 | 155.2 | 1.2e-05 | 0.044 | 12.1 |
| pfu_aug1.0_140.1_50671.t1 | 6 | 3 | DHC_N1 | 777 | 816 | 1.4013e-45 | 155.2 | 1.2e-05 | 0.044 | 12.1 |
| pfu_aug1.0_140.1_50671.t1 | 6 | 4 | DHC_N1 | 938 | 1042 | 1.4013e-45 | 155.2 | 2.7e-10 | 1.0e-06 | 27.4 |
| pfu_aug1.0_140.1_50671.t1 | 5 | 3 | DHC_N2 | 953 | 996 | 0.0 | 234.5 | 0.13 | 470.0 | -1.0 |
| pfu_aug1.0_140.1_50671.t1 | 6 | 5 | DHC_N1 | 1218 | 1253 | 1.4013e-45 | 155.2 | 0.33 | 1200.0 | -2.6 |
| pfu_aug1.0_140.1_50671.t1 | 5 | 4 | DHC_N2 | 1257 | 1497 | 0.0 | 234.5 | 0.0 | 0.0 | 222.0 |
| pfu_aug1.0_140.1_50671.t1 | 6 | 6 | DHC_N1 | 1343 | 1379 | 1.4013e-45 | 155.2 | 0.63 | 2300.0 | -3.5 |
| pfu_aug1.0_140.1_50671.t1 | 5 | 5 | DHC_N2 | 1572 | 1621 | 0.0 | 234.5 | 2.6e-07 | 0.00095 | 17.7 |
| pfu_aug1.0_140.1_50671.t1 | 1 | 1 | AAA_6 | 1671 | 1822 | 1.1e-18 | 67.5 | 5.7e-22 | 2.1e-18 | 66.7 |
Transcript
| Transcript ID | pfu_aug1.0_140.1_50671.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_140.1_50671.t1 atggacgaacgccattggtggatcgctggtaaaatccaggaaactttcaaaattggcggtttcgacaatccaacccttct tgaagattttatgacagaagagacaacacttgccaaaataaataggtttttcaaagctggaggaccctgcagattattct tctattgtgaaaagccagataatggggtgttatcatcaagggaactgcatgtcacgggtaccttggctgccctgaaagat gtagaccttgaaaaagtcaatattttgtatttccttaggaatagagtagagaaagatgttgacacctcgcggtatgagcg tgacatattttgtggtgagcttaagcacaatactattgagacgctcactactctattgtcagatgtctatatacccctta cgaaagctcagaaggaatggggtgaatgcagctcagagagccaaacaagtctgatgcacagcatggacaagttccttacg gctctgaatgaatctactgcatctatgcaaacttcaaagcaactgatgctgagacagcctccagaaaatgtggttcaaca tgatttcaaactacaacgtgcagttgccactgaccctcaggtcataagtcaatatgaagagctagtcacggactggatta ataccatagaagctatgctgaatgacacctcagatgaaagattcatggatccaaatgctggacctttatctgaattagaa agatggcggcggagacaaagactgcttactagcattactgaacaacttaaaggaaaagagtgtaaagctgtcattggtgt tcttattacggcaaaatctagactgctgaaaaagtggaagaatgtcgatgcacaaattacagatgccatgaatgacacaa aggataaagtgaagtacttagaatccctgagacgacatttcgacctgttatatcaagacacgacacctgcatccataatc aacaatgctatccccggaattacaaacagtgtgaggcagatggactcgatctcccgatattatgctcgtacaggatttct cggtattgtctacaccaaaatcaccaatcagctagtgttagcctgtaaggagtacatcaagaactgtaccataacgcagt atgaccaggatgagctatggaccaggattaaagacgagatcaagtctagagattctctaccatcggcagaccctcaacag aaaatactgagaagtcaagtggaagcaaaactgaagggtttgacaactcgtggtaagacaaaggagggtaaggatatggg actacaagatgacactttatatggcagactgaaggcgtgtctcaccctgcagggctattacagagaggctctgagatcac tgagggactcacttggtcaaaccaccaacatgtcacactttccttccctaagtagtgtaggcggaccaagtagcttcaca actagatcaaagcaagggacaagctcccgttctggcccaccctctgtatcaccaaagaaaggaatctcttccttgatgac taacgaggcaggacatggggtttccattgctgatgaggatgctattatgtcacacatggacagcttctgtgctaggatca gacagctcatagatgtcattaacactttatctcagtacaataagctagtgaacagtactgctggaattcctaaaccacgg aaagaggacctggtgattgatgatgatgagagtgatgaatacaaatacagaaagaaacaacaagaagccttgaaggccaa aattgattttgatgacgatgaacaagatgatgcaggccctgtgccaatatctattacctcccctgagagatctggattag gggccatagctgaggacgaagagacacaggatgaaaattcagatggtgacgacaagacgatggaaaaatctgagaagaaa gattcggccatggagcatcctggtgatgatgtgtttgaagtcagcaataacaagaatggactgaatgaagatgaactgac agtgttacgaaagtacttccctgaggatgaagaggaggaggggcctagtatatctgccatcatacatgaccatctagaac agatgaccaaggccatgagtgaaagtgtcaccactaaaactatgctggatgtagaatcaaagaatttcatattaggacgg aaattttatgttatagctaatttctcttacttcagaccagatatcatggcatgcttggattgatcaaagcaagggacaag ctcccgttctggcccaccttctgtatcaccaaaaaaaggaatctcttccttgatgactaacgaggcaggacacggggttt ccatcgctgatgaggatgctattatgtcacacatggacagcttctgtgctaggatcagacagcttatagatgtcattaac actctatctcagtacaataagctagtgaacagtactgctggaattcctaaaccacggaaagaggacctggtgattgatga tgatgagagtgatgaatacaaatacagaaagaaacaacaagaagccttgaaggccaaaattgattttgatgacgatgaac aagatgatgcaggccctgtgccgatatctattacctcccctgagagatctggattaggggccatagctgaggacgaagag acacaggatgaaaattcagatggtgacgacaagacgatggagaaatccgagaagaaagattcggccatggaacatcctgg tgatgacgtgtttgaagtcagcaataacaagaatggactgaatgaagatgaactgacagtgttacgaaagtacttccctg aggatgaagaggaggaggggcctagtatatcagccatcatacatgaccatctagaacagatgaccaaggccatgagtgag agtgtcaccactaaaactatgctggatgtggaatcaaaggacaaagacagatttgaggattactacgagaagtttgctaa gatagtacagaacttggagtcgttttttggtgcctacttacattgtattttcatgaacagaactaacacacaaaatgggt tggatatcataacaagatttactccaattcagaatcgtcagggaatcagggccaccatttctgagaagtttgtggaaatt ttcaactgggagtttgagttgagattaccacgtaatgaggtagaggaggtggatcacctacgtatcaggtggtcggagct catggaacttgcagagacggtcagagagaacttgctcaaagagaggagaggagcgtttgaacaagaactagacaaaaatg tcaaagcatttgtggtagaggtgatggagttcaggaatgcctttgactcccagggacctaacgctcccaatacaccacca gccaaagctgtagccagtctacaagaattccagcagaaatacaaactttatgactctaaacgcaatactctagtctcagt gtctaagctgtttggtattgtttgtaaacctttcccagagctggataagacaggagaggaattagacctgctaagtcagc tttacggactcttccagaagtttatacggttcgatactcgcttcagagacacactctgggcagacgttgacctggatgct gcttttattgagaaaaagctagacagtgccgtgttgtacagatcaaatgtgactaatagactagaacttcacgtacaatc actggatcagctcaatagcgcactacagctgttagaggagcttagggacatggaaaataaaatagatagtatctacctac ccatagaaaccatgtatgagaaactcagacacaaagctgagatagaagaaatctgtctaagtgcaagtcgagaattagaa ttagaaatcaagcaacgtgtcacagaggatgaatggaatgaacagatgcttacgtttgaacattacaagaaacgtggtcc aatgttcttggacaaagtctcgacagagaggttgttagaacaactagaagatgcccaggctttgttagctagcatgttga cgtctaaatacatagctccacttcgggatgatacagcattatgggcaaagaaattaaaggatgtaacggaggtgttagag ctgtggttagaagttcaggatctgtggcagtatttagaggcagtgttcagtaatacatcggcagctagggagttgcaatt agaggccaaaagatttgccagaatagacaagagctggacaaagatgatgaagaaagcctttgaaatgagaggagtactgc agtgttgtactggtgatgatgtacctagaggaaatcacctcaggaacatgcagcaggagctggaaatttgttttaagtca ttagtggagtacttagacagtaagaggagggctttcccaagattttactttgtgtcagaccctgtattactggccatgct aagcagaccaaatgatctggagtctgttaaaccacatctcaagtcaatattcagcagtattcatgatgtgagattagagg aagcagaaacaacccaacaagaacctactgatgaaatcggctttacacagtcaagaactggtacgcactcacggcagaaa actacaagtgtcatctctcctggaatacgcagtagtacaccgccaagaatcgataaacgactcactgaaatctatagtgt gaaccccagtgccatggctcacggtcctgcgtatctaccctcggagggaatcattaaggatatcgtcatcagagacgctg tggccgtgtcaagctcagacggtgaaatgctcatacttcaggagagggtaactttgaatgatggagtggaggtatggctg cagaaactgagagattctgtcggtaaaaccctgaaagacatgaatgtcaatattataaacgattgtaacagtggtgttcc tatggatgagtgggcacataagtatcctgcccaggtttgccgtgtgggtatgctgtattactggacaaaagaatgtgatc aggggattgctgaactcaagtatgataggaaagctctacaacaggggcttgccaatttgttgagtcattatataggcacc ttccagtgttctacacagtctgacactgcctttatgggcaaaatcgtccaaggcacagcttctgatggttgttggtgctg ttttgacgaagcccagagtttgagtatggaggccatgtcagtcttactggaccatgtatcagctgtgctaagtgccctca gatcaaggcagccttacgctacactcactaatggagaggagataacaataaagaagggtatggctatacacatgacctac aacaaagacacaacacccccgtcatgtaccctgcctaacgacgtgagacttttgttccgcaatgtatctctagtcaaacc tgatgttacactgatcctgaaatctaagtgtgcatcaatgggattccgagcttctacagtcctggctgctagactgaagg cattgacggaattagtcaaagatcaactgtaa |
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Protein
| Protein ID | pfu_aug1.0_140.1_50671.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_140.1_50671.t1 MDERHWWIAGKIQETFKIGGFDNPTLLEDFMTEETTLAKINRFFKAGGPCRLFFYCEKPDNGVLSSRELHVTGTLAALKD VDLEKVNILYFLRNRVEKDVDTSRYERDIFCGELKHNTIETLTTLLSDVYIPLTKAQKEWGECSSESQTSLMHSMDKFLT ALNESTASMQTSKQLMLRQPPENVVQHDFKLQRAVATDPQVISQYEELVTDWINTIEAMLNDTSDERFMDPNAGPLSELE RWRRRQRLLTSITEQLKGKECKAVIGVLITAKSRLLKKWKNVDAQITDAMNDTKDKVKYLESLRRHFDLLYQDTTPASII NNAIPGITNSVRQMDSISRYYARTGFLGIVYTKITNQLVLACKEYIKNCTITQYDQDELWTRIKDEIKSRDSLPSADPQQ KILRSQVEAKLKGLTTRGKTKEGKDMGLQDDTLYGRLKACLTLQGYYREALRSLRDSLGQTTNMSHFPSLSSVGGPSSFT TRSKQGTSSRSGPPSVSPKKGISSLMTNEAGHGVSIADEDAIMSHMDSFCARIRQLIDVINTLSQYNKLVNSTAGIPKPR KEDLVIDDDESDEYKYRKKQQEALKAKIDFDDDEQDDAGPVPISITSPERSGLGAIAEDEETQDENSDGDDKTMEKSEKK DSAMEHPGDDVFEVSNNKNGLNEDELTVLRKYFPEDEEEEGPSISAIIHDHLEQMTKAMSESVTTKTMLDVESKNFILGR KFYVIANFSYFRPDIMACLDXSKQGTSSRSGPPSVSPKKGISSLMTNEAGHGVSIADEDAIMSHMDSFCARIRQLIDVIN TLSQYNKLVNSTAGIPKPRKEDLVIDDDESDEYKYRKKQQEALKAKIDFDDDEQDDAGPVPISITSPERSGLGAIAEDEE TQDENSDGDDKTMEKSEKKDSAMEHPGDDVFEVSNNKNGLNEDELTVLRKYFPEDEEEEGPSISAIIHDHLEQMTKAMSE SVTTKTMLDVESKDKDRFEDYYEKFAKIVQNLESFFGAYLHCIFMNRTNTQNGLDIITRFTPIQNRQGIRATISEKFVEI FNWEFELRLPRNEVEEVDHLRIRWSELMELAETVRENLLKERRGAFEQELDKNVKAFVVEVMEFRNAFDSQGPNAPNTPP AKAVASLQEFQQKYKLYDSKRNTLVSVSKLFGIVCKPFPELDKTGEELDLLSQLYGLFQKFIRFDTRFRDTLWADVDLDA AFIEKKLDSAVLYRSNVTNRLELHVQSLDQLNSALQLLEELRDMENKIDSIYLPIETMYEKLRHKAEIEEICLSASRELE LEIKQRVTEDEWNEQMLTFEHYKKRGPMFLDKVSTERLLEQLEDAQALLASMLTSKYIAPLRDDTALWAKKLKDVTEVLE LWLEVQDLWQYLEAVFSNTSAARELQLEAKRFARIDKSWTKMMKKAFEMRGVLQCCTGDDVPRGNHLRNMQQELEICFKS LVEYLDSKRRAFPRFYFVSDPVLLAMLSRPNDLESVKPHLKSIFSSIHDVRLEEAETTQQEPTDEIGFTQSRTGTHSRQK TTSVISPGIRSSTPPRIDKRLTEIYSVNPSAMAHGPAYLPSEGIIKDIVIRDAVAVSSSDGEMLILQERVTLNDGVEVWL QKLRDSVGKTLKDMNVNIINDCNSGVPMDEWAHKYPAQVCRVGMLYYWTKECDQGIAELKYDRKALQQGLANLLSHYIGT FQCSTQSDTAFMGKIVQGTASDGCWCCFDEAQSLSMEAMSVLLDHVSAVLSALRSRQPYATLTNGEEITIKKGMAIHMTY NKDTTPPSCTLPNDVRLLFRNVSLVKPDVTLILKSKCASMGFRASTVLAARLKALTELVKDQL |
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