Gene
| Gene Model ID | pfu_aug1.0_140.1_50672 |
|---|---|
| Locus | scaffold140.1 : 95356 ... 136834 : + |
| To GenomeBrowser | scaffold140.1:95356..136834 |
| Genes list of scaffold | scaffold140.1 |
| Synonym | pfu_aug2.0_14413.1_13181 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_140.1_50672.t1 | 3 | 1 | AAA_5 | 12 | 97 | 9.0e-06 | 25.4 | 0.0023 | 2.1 | 8.0 |
| pfu_aug1.0_140.1_50672.t1 | 1 | 1 | AAA_7 | 95 | 363 | 6.0e-28 | 97.6 | 1.3e-30 | 1.2e-27 | 96.7 |
| pfu_aug1.0_140.1_50672.t1 | 3 | 2 | AAA_5 | 114 | 192 | 9.0e-06 | 25.4 | 0.00017 | 0.16 | 11.6 |
| pfu_aug1.0_140.1_50672.t1 | 3 | 3 | AAA_5 | 586 | 649 | 9.0e-06 | 25.4 | 0.66 | 610.0 | 0.0 |
| pfu_aug1.0_140.1_50672.t1 | 4 | 1 | Dynein_heavy | 1044 | 1081 | 1.0e-20 | 73.3 | 0.047 | 44.0 | 1.9 |
| pfu_aug1.0_140.1_50672.t1 | 2 | 1 | AAA_9 | 1048 | 1143 | 4.7e-24 | 84.5 | 1.3e-13 | 1.2e-10 | 40.6 |
| pfu_aug1.0_140.1_50672.t1 | 2 | 2 | AAA_9 | 1163 | 1281 | 4.7e-24 | 84.5 | 1.5e-14 | 1.4e-11 | 43.7 |
| pfu_aug1.0_140.1_50672.t1 | 4 | 2 | Dynein_heavy | 1190 | 1220 | 1.0e-20 | 73.3 | 0.17 | 160.0 | 0.0 |
| pfu_aug1.0_140.1_50672.t1 | 4 | 3 | Dynein_heavy | 1450 | 1598 | 1.0e-20 | 73.3 | 3.3e-15 | 3.1e-12 | 45.3 |
| pfu_aug1.0_140.1_50672.t1 | 4 | 4 | Dynein_heavy | 1707 | 1837 | 1.0e-20 | 73.3 | 2.2e-09 | 2.0e-06 | 26.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_140.1_50672.t1 | gi|291224340|ref|XP_002732163.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| maleGonad | 3 |
Transcript
| Transcript ID | pfu_aug1.0_140.1_50672.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_140.1_50672.t1 atggtggtcgacgattcagaactaatgtttggttacctcaatgttaaccatgactgggtggacggtatttttacatcagc ttgtcggaaagctaataggaaccaaagtacaacatggttgtgtatggatggacccctgaatcaaggctgggcagataact ttaacagtatcctaaatggtgaaaaggttcttcacttaaagaatggagacaaactgttcttgggagacaatatcattctg atctttgagacagatgatctcagccatgcatctcctgccaccatctccagatctataagaacacgcagtctgatggagtt tgccaatgcctcaggtctcaatgtactgttagtggggtctgccggatcagggaagacaactctgatagaggaatttatgg actccatggaaagacaagatccacaagcagcaatatggaaaaagttggtgttttctggatcatctactgccagacagctt cacaccttcctggaatctaacatctatcacagacaaggctttgtgtacggtgccaaagacagcaaaaaactcaagatttt catagacgatgtcaacctaccagtacctgataagtatggtgtgcagagatgcaatgagcttctgaggcagttattagatg acaggatcatatgtaagctacagagaccttttgagatgaagactgtagaaggacttaatgttatatctgccgtctccatg agtgatatagctagtgtatctagtagacctctttcagataggcttctgagacattttgctgtcttcaatctgcccacacc tagtaaggaggcactgaagaacatagtacatggcattttggatattaacatgactgatggagacaagcctggccttgaca ttgacctacataacaatcttgtgaaggcctcctgtgacctacttcatgccctccaggatgttctcagagcctcgcccatg cctggaagatggcattatctcttcacactcaaagatattacaacgtgcttccagtgcatgaagcgtttaccagaagagag cagggcagacgagaccttgatacccgtcatatcgctatggaaacatgaaatgcagaggataatacgagacagaatcagta ggactgccgacctgaactggtacgatcagaccatcagtggcatcgttgatgagacatggtcctccatcaaagacaatcta atggaacattttgtgacgttccctattgatgcccgtctgtatcagagacccatgacatctgtcggaactaaacatatcaa ggttgcgttacagccgattgagaacataagagatgtgcatagttgtctgaacacccacttaacacgttataatgaggagt ttggtaatgtgccgctaaatgtcatgttatctgacttcatcatctcccatgttatcaggatacacagggttctcagcttc catcatggtggtaacatgctgctaataggagctgtgggttcccatctgaccactttatgtaagctagcactccatgttgc tgatgtacctatacataaaatggacacctcaaagaggagtaacttctttgatggactgagatctgctgtcagactgtgtg gatcagagggaaagattctttccatcatgtttacagttcccaacatgccatactcaaaagtgatgcttacagagagaatc aagttacaacatagaaatgagaaattgaaagccaagaatgagacctatgtaggtcccaccacatacagacggttcatgga gacattcagattcctgtacaatgaaaagtcaaaggacaggaccatgaccgtggaccagctcaaaaaagccttgacaacct tggaccagacaagatcagatgccaaagtgatgaagaaagctatcaagtcactgagtgggaaatttgaggaagccaagaaa aacacatctgatctgctgagacagctaacaataaaagccacagctctggagaaactgaaagccaagtgtatgcagggaac tgatctggaagctcatatgaaactgtatgttacagagagtgaggaggaagaagaagaagatctactgttacaaggacaaa ttcatttcaatgtacatgtattatctttatcagaggagtatgatgactatgacaaagaatttgacaaaatgagagaagcc aagctcaaaaatcgtcaagtcctagccaaagaggagcatgcacaggctcagaaaaatgtggaagaatgccgtaagaatct ggaatacgctcgtcaacaggttctgcattggaagggtaaggtagacagacagtgtatagagagactgcggaacctggcta atcctccagtgttagtgggacaggtgatggagatggtgatgatgctgataggaaaacgtttgccgtcacagcgactgtac gagacgcgcgacactggcaaggacgaaatgtccagtaggatgtcctctagctccagtagtacacgcatcggaatcaagaa agatttgtccttcgtagccaagaagagaacaccatcccctgatgcctctaaaggaatcaccatagctagtgctaagtact ccagcgaggactgtgccaccatggtgcagtataccatagccattgtggagtacaccagactgtgtggtccactcaaggca gctctggagaggctgcaggagcttcagagggagattgaggagaatgagaggctccagagggagcgagaggaggagaacaa ggagcctgccgagcccgtaccaacaccagaaccagaaccagactacacggaggaggacctgccgggactccaggagcaag tcaactcactacaacaacagtttgataaatctgtggtggaaaaacactcactggaaatagaactagcctccatgaatgaa agactgaaggcagcttctgaaatggtggatggattaaaggcccaagaggcagtgtggaggaaacatgtcaaagagaacga ctgtaatgaactattacttgctaattgtctgacagcggcagcattcctggcttattgtggaccagccagcatggatataa ggaggagaatgggagagtttttcatgcaggtgtgcgagttccatggcttacctttaccaaagaagaaattgttcaggaac atggagctgatggaattcttatataaaccagttgaggaccatgaggtagagtgtgaccctaacttccgactattccttca caccactgtagagcctcacattgtcccggctcagttagcagcgtacacgtctgtcatgttcttccagaggtcaagggcag acattgaggaacagctgttagacagatttatataccaagagaagtctaaactggaggaagaacgtgcttcattacttcag gaaagaaaggagaacatggaatctctagagaaattagaaagtcaaatgttgacacatctgtcaagtgacgtacgtctaat gaatgatctaccagctaccaagaaactagctgatctcaaaaaacagtatgacgagactgtagacagagttttagaaaggt tttgtaccatagaatttgatgacatgccaatgattctacttcaggttgaggaccatgaggtagagtgtgatcctaacttc cgactattccttcacaccactgtagagcctcacattgtcccggctcagctggccgcgtacacgtctgtcatgttcttcca gaggtcaagggcagacattgaggaacagctgttagacagatttatataccaagagaagtctaagctggaggaggaacgtg cttcattacttcaggaaagaaaggagaacatggaatctctagagaaattagaaagtcaaatgttaacacatctgtcaagt gacgtacgtctaatgaatgatctaccagctaccaagaaactagccgatctcaaaaaacaatatgacgagactgtagacag ccaagagagagtggaatccaatgagcatactaacactcgtaatcgtgatctgtccagagaatttgcacgtcgtggagctg tctgtttccacgttatgcagtacatgagagaagtaaatccaatgtaccaagtatcctatgctcagtatgaaatgctctac gatgctgccatagctcattctgagagagcccagagagcagaggaaaccttggagaagataactaatttagcctacaccac aatggctaggggacttctagagagggataggttcatctttgcattacttctggctattgaagttgaggattccttaggtc atataggtccaggagagagagagttcctggtatcccctaactacagctctgtggtgatgactaagttaggttacactcag ccccctgatagccgtattctacagatgaagaagccatttgattggatgcacgatgatcagttccacaaccttcaggttct ggccacacattttgaatggttccaggagaagtttgaacgcatgcctaaagacggcagagaaatggagtggagaatgctct gtgacaatgtagaaaaggagccagaaaatatgccgctacctgataagatggacagtaaagagtttgctcccatgaagaag ttattggtggttcgagctgtgagaagtgatagattaatacaggcatctacagtatttatcaaccgagttctcggcaaaaa atactttggtgagatgggtattgatttaccggccatgttaagacagagtgcccctgtaccacccagtacacagtccatac ctattctcctcctgttttcgtatgaagcagaggctgccaacaaattatttttagacttctctagccgtaaacaagctcag cggtacataatgaccataacggacaacgccccatccaccgagaggaaagtcaggagacttgtaaagaaaggaattgaaga gactctacttggagatgaccaatatgtcttcaccagaatgaacaaagtgtttgacgccatgccgtcaacaaatacattgt cacataagatgttcccacggccacccactcctttcgatggtccagcgttagcaggtataagtaagactagtaacaaccca gcagtggttaactatggtgtgttctccacggccagttacgctactcacaagatcaggttcaaggatgtagaactatggca aatctgtaacgatctactacagaaaacaccaaagattggaaacagtagcaagtctttccatgagtttgtggtagagaaga taaggaagctgtcgggagatcatgttgtgtttaatgacttcatcatgaaggaatgtaagatactccacgagatcctgact gaagtcagaaataccctacagacaatcaagaatgcctgtgagaatgataagatgggagaccagctgtccgagcgttatct atcggctgctgacgatctgtatcatctccgtattcctcgtatctggtgtcagatgacaggatgtacagcgccacctagca cctataatgccgcacagtggctcagggatttagaagacagatggaaacacttcgagaagatactcaacaatgtaagcaaa tcttga |
|
Protein
| Protein ID | pfu_aug1.0_140.1_50672.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_140.1_50672.t1 MVVDDSELMFGYLNVNHDWVDGIFTSACRKANRNQSTTWLCMDGPLNQGWADNFNSILNGEKVLHLKNGDKLFLGDNIIL IFETDDLSHASPATISRSIRTRSLMEFANASGLNVLLVGSAGSGKTTLIEEFMDSMERQDPQAAIWKKLVFSGSSTARQL HTFLESNIYHRQGFVYGAKDSKKLKIFIDDVNLPVPDKYGVQRCNELLRQLLDDRIICKLQRPFEMKTVEGLNVISAVSM SDIASVSSRPLSDRLLRHFAVFNLPTPSKEALKNIVHGILDINMTDGDKPGLDIDLHNNLVKASCDLLHALQDVLRASPM PGRWHYLFTLKDITTCFQCMKRLPEESRADETLIPVISLWKHEMQRIIRDRISRTADLNWYDQTISGIVDETWSSIKDNL MEHFVTFPIDARLYQRPMTSVGTKHIKVALQPIENIRDVHSCLNTHLTRYNEEFGNVPLNVMLSDFIISHVIRIHRVLSF HHGGNMLLIGAVGSHLTTLCKLALHVADVPIHKMDTSKRSNFFDGLRSAVRLCGSEGKILSIMFTVPNMPYSKVMLTERI KLQHRNEKLKAKNETYVGPTTYRRFMETFRFLYNEKSKDRTMTVDQLKKALTTLDQTRSDAKVMKKAIKSLSGKFEEAKK NTSDLLRQLTIKATALEKLKAKCMQGTDLEAHMKLYVTESEEEEEEDLLLQGQIHFNVHVLSLSEEYDDYDKEFDKMREA KLKNRQVLAKEEHAQAQKNVEECRKNLEYARQQVLHWKGKVDRQCIERLRNLANPPVLVGQVMEMVMMLIGKRLPSQRLY ETRDTGKDEMSSRMSSSSSSTRIGIKKDLSFVAKKRTPSPDASKGITIASAKYSSEDCATMVQYTIAIVEYTRLCGPLKA ALERLQELQREIEENERLQREREEENKEPAEPVPTPEPEPDYTEEDLPGLQEQVNSLQQQFDKSVVEKHSLEIELASMNE RLKAASEMVDGLKAQEAVWRKHVKENDCNELLLANCLTAAAFLAYCGPASMDIRRRMGEFFMQVCEFHGLPLPKKKLFRN MELMEFLYKPVEDHEVECDPNFRLFLHTTVEPHIVPAQLAAYTSVMFFQRSRADIEEQLLDRFIYQEKSKLEEERASLLQ ERKENMESLEKLESQMLTHLSSDVRLMNDLPATKKLADLKKQYDETVDRVLERFCTIEFDDMPMILLQVEDHEVECDPNF RLFLHTTVEPHIVPAQLAAYTSVMFFQRSRADIEEQLLDRFIYQEKSKLEEERASLLQERKENMESLEKLESQMLTHLSS DVRLMNDLPATKKLADLKKQYDETVDSQERVESNEHTNTRNRDLSREFARRGAVCFHVMQYMREVNPMYQVSYAQYEMLY DAAIAHSERAQRAEETLEKITNLAYTTMARGLLERDRFIFALLLAIEVEDSLGHIGPGEREFLVSPNYSSVVMTKLGYTQ PPDSRILQMKKPFDWMHDDQFHNLQVLATHFEWFQEKFERMPKDGREMEWRMLCDNVEKEPENMPLPDKMDSKEFAPMKK LLVVRAVRSDRLIQASTVFINRVLGKKYFGEMGIDLPAMLRQSAPVPPSTQSIPILLLFSYEAEAANKLFLDFSSRKQAQ RYIMTITDNAPSTERKVRRLVKKGIEETLLGDDQYVFTRMNKVFDAMPSTNTLSHKMFPRPPTPFDGPALAGISKTSNNP AVVNYGVFSTASYATHKIRFKDVELWQICNDLLQKTPKIGNSSKSFHEFVVEKIRKLSGDHVVFNDFIMKECKILHEILT EVRNTLQTIKNACENDKMGDQLSERYLSAADDLYHLRIPRIWCQMTGCTAPPSTYNAAQWLRDLEDRWKHFEKILNNVSK S |
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