Gene
| Gene Model ID | pfu_aug1.0_140.1_50676 |
|---|---|
| Locus | scaffold140.1 : 187126 ... 203162 : + |
| To GenomeBrowser | scaffold140.1:187126..203162 |
| Genes list of scaffold | scaffold140.1 |
| Synonym | pfu_aug2.0_217.1_23678 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_140.1_50676.t1 | 1 | 1 | NB-ARC | 7 | 252 | 1.7e-08 | 33.7 | 4.0e-11 | 2.7e-08 | 33.0 |
| pfu_aug1.0_140.1_50676.t1 | 3 | 1 | TPR_12 | 368 | 420 | 5.0e-30 | 103.2 | 5.1e-06 | 0.0034 | 17.2 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 1 | TPR_10 | 397 | 428 | 4.0e-18 | 64.6 | 5.2e-05 | 0.035 | 14.0 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 1 | TPR_2 | 397 | 417 | 2.3e-15 | 55.1 | 0.051 | 34.0 | 4.6 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 1 | TPR_7 | 397 | 416 | 5.4e-13 | 47.6 | 0.065 | 44.0 | 4.2 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 1 | TPR_1 | 401 | 418 | 2.5e-19 | 67.9 | 0.023 | 16.0 | 5.3 |
| pfu_aug1.0_140.1_50676.t1 | 4 | 1 | TPR_11 | 403 | 461 | 4.6e-15 | 55.0 | 6.6e-08 | 4.5e-05 | 23.0 |
| pfu_aug1.0_140.1_50676.t1 | 3 | 2 | TPR_12 | 428 | 501 | 5.0e-30 | 103.2 | 2.2e-15 | 1.5e-12 | 47.2 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 2 | TPR_10 | 434 | 468 | 4.0e-18 | 64.6 | 1.0e-05 | 0.0068 | 16.3 |
| pfu_aug1.0_140.1_50676.t1 | 2 | 1 | Apc3 | 434 | 499 | 3.7e-07 | 30.1 | 8.0e-06 | 0.0054 | 16.8 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 2 | TPR_1 | 435 | 463 | 2.5e-19 | 67.9 | 6.6e-09 | 4.5e-06 | 26.0 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 2 | TPR_2 | 435 | 461 | 2.3e-15 | 55.1 | 1.2e-06 | 0.00078 | 19.1 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 2 | TPR_7 | 435 | 461 | 5.4e-13 | 47.6 | 0.00046 | 0.31 | 10.9 |
| pfu_aug1.0_140.1_50676.t1 | 3 | 1 | TPR_19 | 435 | 460 | 6.3e-08 | 32.8 | 0.031 | 21.0 | 5.5 |
| pfu_aug1.0_140.1_50676.t1 | 4 | 1 | TPR_8 | 436 | 463 | 5.6e-14 | 50.7 | 4.1e-07 | 0.00028 | 20.4 |
| pfu_aug1.0_140.1_50676.t1 | 4 | 1 | TPR_14 | 439 | 460 | 1.4e-07 | 31.5 | 0.03 | 20.0 | 6.1 |
| pfu_aug1.0_140.1_50676.t1 | 3 | 2 | TPR_19 | 442 | 516 | 6.3e-08 | 32.8 | 4.8e-05 | 0.032 | 14.5 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 3 | TPR_10 | 476 | 502 | 4.0e-18 | 64.6 | 0.0012 | 0.84 | 9.6 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 3 | TPR_1 | 477 | 501 | 2.5e-19 | 67.9 | 0.00077 | 0.52 | 10.0 |
| pfu_aug1.0_140.1_50676.t1 | 4 | 2 | TPR_11 | 477 | 544 | 4.6e-15 | 55.0 | 2.1e-08 | 1.4e-05 | 24.5 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 3 | TPR_2 | 478 | 501 | 2.3e-15 | 55.1 | 0.00075 | 0.51 | 10.3 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 3 | TPR_7 | 478 | 500 | 5.4e-13 | 47.6 | 0.1 | 70.0 | 3.5 |
| pfu_aug1.0_140.1_50676.t1 | 4 | 2 | TPR_8 | 479 | 501 | 5.6e-14 | 50.7 | 0.033 | 22.0 | 5.1 |
| pfu_aug1.0_140.1_50676.t1 | 4 | 2 | TPR_14 | 480 | 509 | 1.4e-07 | 31.5 | 0.0024 | 1.6 | 9.5 |
| pfu_aug1.0_140.1_50676.t1 | 3 | 3 | TPR_12 | 515 | 588 | 5.0e-30 | 103.2 | 1.8e-11 | 1.2e-08 | 34.7 |
| pfu_aug1.0_140.1_50676.t1 | 4 | 3 | TPR_11 | 515 | 584 | 4.6e-15 | 55.0 | 0.00016 | 0.11 | 12.2 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 4 | TPR_2 | 521 | 543 | 2.3e-15 | 55.1 | 0.0078 | 5.3 | 7.2 |
| pfu_aug1.0_140.1_50676.t1 | 4 | 3 | TPR_8 | 521 | 543 | 5.6e-14 | 50.7 | 0.00012 | 0.082 | 12.7 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 4 | TPR_10 | 522 | 550 | 4.0e-18 | 64.6 | 0.0019 | 1.3 | 9.0 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 4 | TPR_7 | 522 | 548 | 5.4e-13 | 47.6 | 0.00053 | 0.36 | 10.7 |
| pfu_aug1.0_140.1_50676.t1 | 4 | 3 | TPR_14 | 522 | 543 | 1.4e-07 | 31.5 | 0.042 | 29.0 | 5.6 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 4 | TPR_1 | 523 | 546 | 2.5e-19 | 67.9 | 0.00033 | 0.22 | 11.1 |
| pfu_aug1.0_140.1_50676.t1 | 3 | 3 | TPR_19 | 528 | 584 | 6.3e-08 | 32.8 | 7.8e-05 | 0.053 | 13.8 |
| pfu_aug1.0_140.1_50676.t1 | 2 | 2 | Apc3 | 529 | 602 | 3.7e-07 | 30.1 | 0.00086 | 0.58 | 10.3 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 5 | TPR_7 | 561 | 584 | 5.4e-13 | 47.6 | 0.00062 | 0.41 | 10.5 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 5 | TPR_2 | 562 | 584 | 2.3e-15 | 55.1 | 0.019 | 13.0 | 6.0 |
| pfu_aug1.0_140.1_50676.t1 | 4 | 4 | TPR_11 | 562 | 584 | 4.6e-15 | 55.0 | 0.32 | 220.0 | 1.5 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 5 | TPR_1 | 563 | 588 | 2.5e-19 | 67.9 | 0.0077 | 5.2 | 6.8 |
| pfu_aug1.0_140.1_50676.t1 | 5 | 5 | TPR_10 | 563 | 588 | 4.0e-18 | 64.6 | 0.0038 | 2.6 | 8.1 |
| pfu_aug1.0_140.1_50676.t1 | 4 | 4 | TPR_14 | 563 | 581 | 1.4e-07 | 31.5 | 0.39 | 260.0 | 2.7 |
| pfu_aug1.0_140.1_50676.t1 | 4 | 4 | TPR_8 | 565 | 585 | 5.6e-14 | 50.7 | 0.027 | 18.0 | 5.3 |
Transcript
| Transcript ID | pfu_aug1.0_140.1_50676.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_140.1_50676.t1 atgttaggctgttggaaaacaacacagatatatggaatctttggtaccagatctataggaaaatctcgcctagcagaaca attcctgatagaagtcagagaacaactgaaactatgtccaaagaagcatgtggttaatttaagagattgcctagaaataa tggcgactgtgatgccacttcttcctgactatgacgaaaatttcaaggattataatgcttcccaggtagctgcacacttt gtgacatctatcccagattctgaacttgttgctattatgtttgacaacacagaggatcttttggataatggcttggaagt cgactttctcaaaatcctatcaattctaagtcaaagcagcaatatcaaaataattatcacttcaacaactgaactcgatt tgtcctgcattcaaaattgtcgcgagattagactatcggcacttgttgaaaaggagggactggatttaatgacctcggct gcacctcatatagacttcggtcatcatgctgtggacatcgtaaatagatgtgaagggctacctttagctctattgatggt ggcgtctgttctggaacaaaactcgattttaacacctgaggatctggtcagacttctggaccaatgtcgaatcgacacgt taagttctgatatgtatccatctacagatcgcattgcaacagtttacatgacgttcatcagacgtctgacggacaaggtt cagaaggctttatcagacctcagctacatccctggttccttcaacttacaacatgctgctgggatgctagatatcagacc aacgggcaaccggtgccgactgaggacgacaatctgctacgcaaggaacaaatggtgtggttatccggattacatgcgca taaccctctcacttttccggttaccaaaagatatcaaggaagcaactgagagtgacagatctgcttcgtacttaaatata cttctatctttcaacggaagcggctatttaaacacctcactgtacgacaagcgtgatgacttctgcttcaaaataactaa cttcatgagtaggaacattccgtcttcttctgcttatggcgtttttgtttctcggcagatacgcattctgaagcaggcat ttgaaatagaaaatgagctaggaatgcactacgaaagacttattctacagactctttcatccacagccgttctaagtgca aatattggagattttgaggaggctcttaagtttcattcagagagtctaaagcgtcgaaaaatagtttatgggacagagaa ccattcatttattggatcagtaatgaataacatagggctggtatatttaaaaatgggagacattgagaaggcattcaggt actttaaaagaggattagaaataaaggagtcaacgaaaggcccagagaaagcaatactcatttcacgcaaaaatgtggct gattgtctaacgcggatgggtcgtcacgccgaagctttagaagtagttaataaagcgctagaaacacttggaaaggtacc cgatctctacaacgaggtgcgagcaaaggtttatgacgtaagtgcatcgatatataagggaatggaggattatgattcgg cattaagcatgctagaaaaagctcttcgtgttcgatctgacttgctgccctacaatatatacaatgtccagaatatgtgt gaatgcgcaaacctgcacgtgcaaattggaaactatgatagagcagagaagtacgttggaaatgtgctgaaagtgaggca gaagttccgtaaagaacatccgaatgagttacttattgttcggtgtgttataactgcgattcacctagagggagcaaagg gcggtgatctacaaaagcttgaatatttcaatgaaattggattagaggaggcgaatcgtttgaatttggtgtcacaagca agtacctataatcaaaatgaattagaacttgttataagtgattgcaaaaaggcgtattctactgtgaaaactagactttc ccaaaatatcaaatatgaataa |
|
Protein
| Protein ID | pfu_aug1.0_140.1_50676.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_140.1_50676.t1 MLGCWKTTQIYGIFGTRSIGKSRLAEQFLIEVREQLKLCPKKHVVNLRDCLEIMATVMPLLPDYDENFKDYNASQVAAHF VTSIPDSELVAIMFDNTEDLLDNGLEVDFLKILSILSQSSNIKIIITSTTELDLSCIQNCREIRLSALVEKEGLDLMTSA APHIDFGHHAVDIVNRCEGLPLALLMVASVLEQNSILTPEDLVRLLDQCRIDTLSSDMYPSTDRIATVYMTFIRRLTDKV QKALSDLSYIPGSFNLQHAAGMLDIRPTGNRCRLRTTICYARNKWCGYPDYMRITLSLFRLPKDIKEATESDRSASYLNI LLSFNGSGYLNTSLYDKRDDFCFKITNFMSRNIPSSSAYGVFVSRQIRILKQAFEIENELGMHYERLILQTLSSTAVLSA NIGDFEEALKFHSESLKRRKIVYGTENHSFIGSVMNNIGLVYLKMGDIEKAFRYFKRGLEIKESTKGPEKAILISRKNVA DCLTRMGRHAEALEVVNKALETLGKVPDLYNEVRAKVYDVSASIYKGMEDYDSALSMLEKALRVRSDLLPYNIYNVQNMC ECANLHVQIGNYDRAEKYVGNVLKVRQKFRKEHPNELLIVRCVITAIHLEGAKGGDLQKLEYFNEIGLEEANRLNLVSQA STYNQNELELVISDCKKAYSTVKTRLSQNIKYE |
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