Gene
| Gene Model ID | pfu_aug1.0_14000.1_18072 |
|---|---|
| Locus | scaffold14000.1 : 20296 ... 23445 : + |
| To GenomeBrowser | scaffold14000.1:20296..23445 |
| Genes list of scaffold | scaffold14000.1 |
| Synonym | pfu_aug2.0_6189.1_32868 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14000.1_18072.t1 | 1 | 1 | 2-Hacid_dh | 49 | 302 | 3.0e-19 | 68.7 | 2.1e-22 | 3.9e-19 | 68.4 |
| pfu_aug1.0_14000.1_18072.t1 | 1 | 1 | 2-Hacid_dh_C | 92 | 271 | 0.0 | 187.5 | 0.0 | 0.0 | 187.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14000.1_18072.t1 | gi|225706132|gb|ACO08912.1| | Glyoxylate reductase/hydroxypyruvate reductase [Osmerus mordax] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_14000.1_18072.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14000.1_18072.t1 atggcccgttatggagtcccgtcgtcacagtcagtcagcgtgcaagctttaagaattcgctggtacaagacagtagatag gccaagctccaagcctagtgtccgtctggtgatattaggatcatatccacggtataaaaggcgagacaagcttaaggtaa taggaacaatgtctgtcggtctggagcaccttgacttaccagagatccgcaagagagggattaaagtaggttacacccct aatgtactgactgatgccacggcagagatgaccatggcgcttctattggctacgtcacgtcgattacaagaaggtttttc tgccgtgcatgaaggaggatggggtacgtggggtggtggaatgtacctctgtggaaaacaaattaccggaagtgtagtcg gcatagttggtctaggtcgtataggattggctgttgctaagagactacagcccttcggagtgtctcagttcctttactct ggaaacagtgctaaaccttgggcttccgatgtaaatgcaaagtttgttaaatttgacacgctcctacaacaatcagactt cgttattgcttgttgttccatgaacgcacagaataaaggtctcttcaacaaagatgcattttctaaaatgaaggattctg ccatttttataaacaccagtcgtggggtacttgtaaaccaggaggatctgtacgatgccttgaaatctggtaaaatatta gctgcaggtctagatgtcgctacaccagaaccactacccaaagatcatcctctgaaaacgctgaaaaactgtgttataac gcctcacttaggaagtgccacaacacaagctaggaatctaatggctgagcttactgcaaagaatgtgttagctggactta aaggagaggcacttccttcacctgtcccttag |
|
Protein
| Protein ID | pfu_aug1.0_14000.1_18072.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14000.1_18072.t1 MARYGVPSSQSVSVQALRIRWYKTVDRPSSKPSVRLVILGSYPRYKRRDKLKVIGTMSVGLEHLDLPEIRKRGIKVGYTP NVLTDATAEMTMALLLATSRRLQEGFSAVHEGGWGTWGGGMYLCGKQITGSVVGIVGLGRIGLAVAKRLQPFGVSQFLYS GNSAKPWASDVNAKFVKFDTLLQQSDFVIACCSMNAQNKGLFNKDAFSKMKDSAIFINTSRGVLVNQEDLYDALKSGKIL AAGLDVATPEPLPKDHPLKTLKNCVITPHLGSATTQARNLMAELTAKNVLAGLKGEALPSPVP |
|