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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_14000.1_18075
Locus scaffold14000.1 : 29603 ... 33212 : -
To GenomeBrowser scaffold14000.1:29603..33212
Genes list of scaffold scaffold14000.1
Synonym pfu_aug2.0_970.1_01291

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_14000.1_18075.t1 1 1 Gal-3-0_sulfotr 128 168 5.5e-10 38.4 1.5e-13 7.3e-10 38.0

Transcript
Transcript IDpfu_aug1.0_14000.1_18075.t1
Definition-
>pfu_aug1.0_14000.1_18075.t1
aaagttcgcggtactcacagtgttagttgtgattctgtattctgtgtcaccaaaactggatacttttacaatagtgtttg
cacgtacacatttcggactatcagtggacgactataacggacaatggttccaaagtttgcatcgtttatttcataatcct
cttcaagtcatcagagatggagaattgcacaacgtgtctggagggcaaatagattccatattacatagccctctacatgt
catcagaggtggagaatcgtacaatgtgtctgatgggcaaacggagaccatattacacgacctaattgtaaaagggaata
agacacgatcgtctctgccaaattcaacagtagataaatcagtgacatctatttctacagaaagaagagaggaaattcat
aatgttgccttcttaaaaattcacaaggcagcgagcagtactgttcaaaacatcctgttaagatttgggtatgacagaaa
tctagtttttgtgtttcctaagataagattcagaaatgcaacatacatcaaatgcatttatcgcatgaaaccgccactta
atttatgtggaggcaaccagattttattggcggtcaccagataa

Protein
Protein IDpfu_aug1.0_14000.1_18075.t1
Definition-
>pfu_aug1.0_14000.1_18075.t1
KFAVLTVLVVILYSVSPKLDTFTIVFARTHFGLSVDDYNGQWFQSLHRLFHNPLQVIRDGELHNVSGGQIDSILHSPLHV
IRGGESYNVSDGQTETILHDLIVKGNKTRSSLPNSTVDKSVTSISTERREEIHNVAFLKIHKAASSTVQNILLRFGYDRN
LVFVFPKIRFRNATYIKCIYRMKPPLNLCGGNQILLAVTR

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