Gene
| Gene Model ID | pfu_aug1.0_14142.1_61309 |
|---|---|
| Locus | scaffold14142.1 : 6116 ... 11521 : + |
| To GenomeBrowser | scaffold14142.1:6116..11521 |
| Genes list of scaffold | scaffold14142.1 |
| Synonym | pfu_aug2.0_8251.1_06332 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14142.1_61309.t1 | 2 | 1 | SPARC_Ca_bdg | 21 | 82 | 2.5e-09 | 37.1 | 1.5e-06 | 0.0013 | 18.6 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 1 | EF-hand_8 | 22 | 51 | 5.8e-18 | 64.2 | 1.3e-06 | 0.0011 | 18.5 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 1 | EF-hand_1 | 24 | 52 | 3.3e-28 | 94.8 | 8.5e-10 | 7.4e-07 | 28.0 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 1 | EF-hand_6 | 24 | 52 | 1.9e-23 | 80.1 | 7.1e-10 | 6.2e-07 | 28.7 |
| pfu_aug1.0_14142.1_61309.t1 | 2 | 1 | EF-hand_7 | 25 | 84 | 2.9e-27 | 94.5 | 2.7e-17 | 2.4e-14 | 53.2 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 1 | EF-hand_5 | 25 | 49 | 6.2e-21 | 72.7 | 5.0e-09 | 4.3e-06 | 25.8 |
| pfu_aug1.0_14142.1_61309.t1 | 2 | 1 | EF-hand_9 | 29 | 82 | 3.3e-07 | 30.1 | 1.5e-06 | 0.0013 | 18.6 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 2 | EF-hand_8 | 48 | 86 | 5.8e-18 | 64.2 | 2.7e-05 | 0.024 | 14.2 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 2 | EF-hand_1 | 61 | 85 | 3.3e-28 | 94.8 | 9.7e-09 | 8.4e-06 | 24.7 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 2 | EF-hand_6 | 66 | 86 | 1.9e-23 | 80.1 | 7.7e-06 | 0.0068 | 16.2 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 2 | EF-hand_5 | 66 | 84 | 6.2e-21 | 72.7 | 0.0039 | 3.4 | 7.1 |
| pfu_aug1.0_14142.1_61309.t1 | 2 | 2 | SPARC_Ca_bdg | 95 | 152 | 2.5e-09 | 37.1 | 6.5e-06 | 0.0057 | 16.6 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 3 | EF-hand_8 | 97 | 124 | 5.8e-18 | 64.2 | 2.8e-05 | 0.024 | 14.2 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 3 | EF-hand_1 | 98 | 126 | 3.3e-28 | 94.8 | 7.3e-10 | 6.4e-07 | 28.2 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 3 | EF-hand_6 | 98 | 127 | 1.9e-23 | 80.1 | 9.3e-10 | 8.1e-07 | 28.4 |
| pfu_aug1.0_14142.1_61309.t1 | 2 | 2 | EF-hand_7 | 99 | 153 | 2.9e-27 | 94.5 | 2.8e-14 | 2.5e-11 | 43.5 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 3 | EF-hand_5 | 99 | 123 | 6.2e-21 | 72.7 | 6.7e-10 | 5.9e-07 | 28.5 |
| pfu_aug1.0_14142.1_61309.t1 | 2 | 2 | EF-hand_9 | 103 | 152 | 3.3e-07 | 30.1 | 0.00091 | 0.79 | 9.6 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 4 | EF-hand_8 | 118 | 153 | 5.8e-18 | 64.2 | 4.5e-09 | 3.9e-06 | 26.3 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 4 | EF-hand_1 | 135 | 153 | 3.3e-28 | 94.8 | 7.7e-07 | 0.00067 | 18.7 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 4 | EF-hand_5 | 139 | 153 | 6.2e-21 | 72.7 | 2.6e-05 | 0.022 | 14.0 |
| pfu_aug1.0_14142.1_61309.t1 | 4 | 4 | EF-hand_6 | 141 | 153 | 1.9e-23 | 80.1 | 0.0037 | 3.2 | 7.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14142.1_61309.t1 | gi|301775366|ref|XP_002923095.1| | 1.0e-26 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_14142.1_61309.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14142.1_61309.t1 atgcaacacccgccgcgactgccaaatagaaacgtgtcaaatgcggtcgtgtccagatacgtaaaagacgagatgagaaa attttttaacaaaattgataccgatggaaacgggaaacttgatccaaacgagatacgaacccttctacagtccctgaatc aaaatcccacggaaggtgacgttcaacaacttatagagaattatgacaaaaatgggaatggcgtcatggaatttgaggag tttgtagattttttggacggttataagaaagatccatgtacgataagaaacgaattaagggacgcttttaaagttctaga tcaaaacaaggatggtaaagtaagcgctcttgaattaaagacagtaatgacaatgttaggagaacagcttacagaggacc aggccaatgaaatgatatcacaagccgataaagacggagatggacaggtggattatgaaggtaagatggaagtctgcgac aacacggccgttactgaattgatagtatga |
|
Protein
| Protein ID | pfu_aug1.0_14142.1_61309.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14142.1_61309.t1 MQHPPRLPNRNVSNAVVSRYVKDEMRKFFNKIDTDGNGKLDPNEIRTLLQSLNQNPTEGDVQQLIENYDKNGNGVMEFEE FVDFLDGYKKDPCTIRNELRDAFKVLDQNKDGKVSALELKTVMTMLGEQLTEDQANEMISQADKDGDGQVDYEGKMEVCD NTAVTELIV |
|