Gene
| Gene Model ID | pfu_aug1.0_1418.1_44027 |
|---|---|
| Locus | scaffold1418.1 : 10963 ... 27975 : - |
| To GenomeBrowser | scaffold1418.1:10963..27975 |
| Genes list of scaffold | scaffold1418.1 |
| Synonym | pfu_aug2.0_63.1_10207 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1418.1_44027.t1 | 2 | 1 | Sema | 3 | 334 | 0.0 | 362.0 | 0.0 | 0.0 | 361.2 |
| pfu_aug1.0_1418.1_44027.t1 | 2 | 2 | Sema | 512 | 561 | 0.0 | 362.0 | 0.12 | 1900.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1418.1_44027.t1 | gi|8134678|sp|Q26473.1|SEM1A_SCHAM | Semaphorin-1A | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1418.1_44027.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1418.1_44027.t1 atgacttacgtaaaaataagggaggacgacggagtgggacagtgtccattcgatccggaacacaacagtacctcagtata ctcagatggtaaactgtactcggcgactgtggctgacttttccgcccaagacccattgattcttaaagggggcgcttccc accttctacgtactgaacaacatgattccaaatggctaaatgatcctgattttgtgaattccttcgacattggcgataaa atttacttcttcttcaaagaaacagctgttgagcatattaactgcgggaaggccgtgttctctcgggttggaagggtatg taagaccgaccaagggggacaatacctgatgagtaacgtgtggacgtcattcttcaaggctcgtcttaactgcagtatac caggagactatcctttctactttgatgaaatacagtccacttctgactatggtcaaggtaactacatgtccaccaaggac agcgctaaccggacaaacatgttttatgctgtgttccgtactccagacaacatcatgcgagcctcggctgtgtgcgcgtt cagatactctgacatcgtccgaacgttcgagggcaagttcaaaggtcaggaatccccctaccacaactggctggccgtac ccagacaacagacccccacacctcacccccagagctgtgtcaacgatacgaaacgtctaactgacgtcacactcaacttc atcaagtctcacaccctgatggacgaggcggtgcccgctgctgggggaatgccggtgtttgttatgccgaccactgatag gggtcgtatgaccaaagtggccattgattggcaggtgcacgccagtgatggacggtactatgacgtcatctttgttggca cagatgacggaagagttatcaaagcgatcaataaagggcgtggtagcgaggtggagacggtagttatagaggatatacag gtcttccccgggggtgaggctgtacgtgacctacgtatacacggcgcccgggggttgggcaagctggtggtcgtgtccaa ggacagcgtggtgtccatacctctacatcagtgtgaacaacagaaaacatgcagaagtttttgttttattcgtctttttc tatccctcacttttctagtcattacaactaaaccaaatactacgccaaagccgacagaggctccaacaactgtcccatca tgcaattgtgcacaaatgacgacagttaagaaagataagccagtcgttcgaccaactgagaagccagattcagccccagt acaagagggaaagttaggcattaaggatatacttcaaatctccattactgaggaagatgaaccaacgatatttgacgccg ggccgttaagccaaaatgataaaaatgataaaaccgaaccaaaagcaagtagccaatcagagaacaacgaatcttcatta tctgtcgcagagacggccatcgctattgttgtttccattgttctgtcatctatagcgtcatttattctgggatacaaagt acgagactgtcgcgggaatgaggaggaagccaacaataccgctaactttgcacaagactattacggttctttaacaaaga atcataataagttcaaagacaatgaacctcgttacatcaatcattcacaattacaagactctaacattaataattcacaa aagcaattgaatttgctcgtgaaatattctccaaaggaatctaatttaccaaatggaagtgctccacagaagcctatttc taacattcctacaagtattccagacaaaacgtacgtgtag |
|
Protein
| Protein ID | pfu_aug1.0_1418.1_44027.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1418.1_44027.t1 MTYVKIREDDGVGQCPFDPEHNSTSVYSDGKLYSATVADFSAQDPLILKGGASHLLRTEQHDSKWLNDPDFVNSFDIGDK IYFFFKETAVEHINCGKAVFSRVGRVCKTDQGGQYLMSNVWTSFFKARLNCSIPGDYPFYFDEIQSTSDYGQGNYMSTKD SANRTNMFYAVFRTPDNIMRASAVCAFRYSDIVRTFEGKFKGQESPYHNWLAVPRQQTPTPHPQSCVNDTKRLTDVTLNF IKSHTLMDEAVPAAGGMPVFVMPTTDRGRMTKVAIDWQVHASDGRYYDVIFVGTDDGRVIKAINKGRGSEVETVVIEDIQ VFPGGEAVRDLRIHGARGLGKLVVVSKDSVVSIPLHQCEQQKTCRSFCFIRLFLSLTFLVITTKPNTTPKPTEAPTTVPS CNCAQMTTVKKDKPVVRPTEKPDSAPVQEGKLGIKDILQISITEEDEPTIFDAGPLSQNDKNDKTEPKASSQSENNESSL SVAETAIAIVVSIVLSSIASFILGYKVRDCRGNEEEANNTANFAQDYYGSLTKNHNKFKDNEPRYINHSQLQDSNINNSQ KQLNLLVKYSPKESNLPNGSAPQKPISNIPTSIPDKTYV |
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