Gene
Gene Model ID | pfu_aug1.0_14212.1_03456 |
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Locus | scaffold14212.1 : 17714 ... 21835 : - |
To GenomeBrowser | scaffold14212.1:17714..21835 |
Genes list of scaffold | scaffold14212.1 |
Synonym | pfu_aug2.0_1311.1_04958 |
Manual annotation
Study field | signal molecules |
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Gene name | Serine/threonine-protein kinase H1 homolog |
Description | Serine/threonine-protein kinase H1 homolog partial sequence. BLASTP top hit to AY818357 (Pinctada fucata). |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_14212.1_03456.t1 | 1 | 1 | Pkinase | 80 | 294 | 0.0 | 209.9 | 0.0 | 0.0 | 209.4 |
pfu_aug1.0_14212.1_03456.t1 | 1 | 1 | Pkinase_Tyr | 83 | 293 | 8.2e-32 | 110.2 | 3.5e-35 | 1.0e-31 | 109.9 |
pfu_aug1.0_14212.1_03456.t1 | 2 | 1 | Kinase-like | 83 | 110 | 9.9e-06 | 24.7 | 0.007 | 21.0 | 3.9 |
pfu_aug1.0_14212.1_03456.t1 | 2 | 2 | Kinase-like | 186 | 280 | 9.9e-06 | 24.7 | 2.2e-07 | 0.00065 | 18.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_14212.1_03456.t1 | gi|83288255|sp|Q4KTY1.1|KPSH1_PINFU | Serine/threonine-protein kinase H1 homolog [Pinctada fucata] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_14212.1_03456.t1 |
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Definition | - |
>pfu_aug1.0_14212.1_03456.t1 atgggttgtatgagtagtaagttagtgcccgaggggccatcgggaaaccaagcagttgtcgaagtttttaacaatgaaag gaataaggaatacaacaggcagaatccacaccagaacaggggccctcgggatccgaccaaggaccctaaaaatgctggac ccccacccgagggacagaggtccaacagaaaggtgaagaaatacagggataaattcgaccctcgagttacagctaagtat gacataaaagcattgattggaagggggaatttcagcaaggtcgtgcgtgttgaacacagggtaactaaacaaccctatgc aatcaagatgatagacagagtgcaagggaaagaagttttcgaatcggaggtggctgtcctccgccgagttaaacactcct atatcattcagctcattgaagttttcgaaacaaaagataaagtgtacatggtaatggagcttgctacaggtggtgaatta tttgataggattatagctaaaggttccttcacagagagggatgctacacgggtattgaacatggttctagatggtgtgaa gtacttacacgggctaggcatcactcatcgggatttaaaacccgaaaatcttttatactatcatcctggacatgattcta aaatcatgatcactgatttcggtctcagttctacgagaaaaggaccagaaaatttcatgcggactacatgtgggacccca gaatacattgcaccggaaatcatcgcccggaaaccttacatgtgtcaagtggacatgtgggctgtaggggtgataaccta cattctactcagtggaacgatgccgtttgacgatgaaaataaaactaggttgtatagactcatcctcaaggccaagtata gctatgccggagaggcgtctgacgtcaaagtatga |
Protein
Protein ID | pfu_aug1.0_14212.1_03456.t1 |
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Definition | - |
>pfu_aug1.0_14212.1_03456.t1 MGCMSSKLVPEGPSGNQAVVEVFNNERNKEYNRQNPHQNRGPRDPTKDPKNAGPPPEGQRSNRKVKKYRDKFDPRVTAKY DIKALIGRGNFSKVVRVEHRVTKQPYAIKMIDRVQGKEVFESEVAVLRRVKHSYIIQLIEVFETKDKVYMVMELATGGEL FDRIIAKGSFTERDATRVLNMVLDGVKYLHGLGITHRDLKPENLLYYHPGHDSKIMITDFGLSSTRKGPENFMRTTCGTP EYIAPEIIARKPYMCQVDMWAVGVITYILLSGTMPFDDENKTRLYRLILKAKYSYAGEASDVKV |