Gene
| Gene Model ID | pfu_aug1.0_1422.1_58494 |
|---|---|
| Locus | scaffold1422.1 : 34546 ... 46526 : + |
| To GenomeBrowser | scaffold1422.1:34546..46526 |
| Genes list of scaffold | scaffold1422.1 |
| Synonym | pfu_aug2.0_984.1_14698 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1422.1_58494.t1 | 1 | 1 | 7tm_1 | 4 | 177 | 2.1e-23 | 82.7 | 9.8e-27 | 2.9e-23 | 82.3 |
| pfu_aug1.0_1422.1_58494.t1 | 1 | 1 | 7TM_GPCR_Srsx | 29 | 191 | 1.7e-06 | 27.4 | 9.1e-10 | 2.7e-06 | 26.7 |
| pfu_aug1.0_1422.1_58494.t1 | 1 | 1 | 7TM_GPCR_Srw | 43 | 195 | 1.2e-06 | 27.9 | 6.3e-10 | 1.9e-06 | 27.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1422.1_58494.t1 | gi|321463306|gb|EFX74323.1| | putative capa receptor [Daphnia pulex] | 5.0e-38 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1422.1_58494.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1422.1_58494.t1 atgacggatctgcgacgatcggcaaagatcatcgtcttcatctgggtttttgctgctatatgcgcaattccatatccgat acacactcgtactttctatttcatcacaaatccttacaccaaggaacccatcaaggactcgtacatgtgtaatattccca gggaatggcattcttggatgaaatacatgtttcagatttctactttcattttctttgtattacctatgacgttgatcact gtactatacatcctgattgctgtgaccctgcatagaacatctctgatcagagcaaattcggaggattcatcaaaaggtgg tcacccatcacattcaatgaagagtgttttacgaatgcttgttgctgttgttgtggctttcttcttttgttgggctcctt tccacgtacagagactatataccctgtataacaaaacatggactaaatactcactggaggtacaaagtcatctattctac atctctggggtgctgtattttgtgagttcaacagtaaatcctatactatacaacgtgatgtctaaaagataccgccaagc attcagagagacactatgttgttgtttttcaagacgcacaactaaatatgaaagaagtctcgtatattattacaatatga agtcaccgatgaacctcaaacttcacaggaggaaaacaacacgggaatacagggtcagtcaattcgaacactctaattcc agcatcaataacggatatccggtatcaaacaatatggtgtcagagattccaaactgtccttcaagtgtcaaattgttggt agagccggcagtggacaatgtccaagtagataaaacaaacgggtatactaaactgagaaacaacgatgtatatttcccga cctcattttctgacatatgtcaacctctctcaaaaaatgacatgactcttttgaaaaacagctttttgagcaagtctgac aatttggaaactatgtcttcggctaagaataacacatttaaagtttcaagttacaaagataatatagactcatttctgtt cggtcgaattgatagtcacgaaagcataaaatattcagataacggagctgagttactgttaaccatttttattcgcgagc gttttattttcgcgatattcgcgatgtatttcgattcgcgaatataa |
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Protein
| Protein ID | pfu_aug1.0_1422.1_58494.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1422.1_58494.t1 MTDLRRSAKIIVFIWVFAAICAIPYPIHTRTFYFITNPYTKEPIKDSYMCNIPREWHSWMKYMFQISTFIFFVLPMTLIT VLYILIAVTLHRTSLIRANSEDSSKGGHPSHSMKSVLRMLVAVVVAFFFCWAPFHVQRLYTLYNKTWTKYSLEVQSHLFY ISGVLYFVSSTVNPILYNVMSKRYRQAFRETLCCCFSRRTTKYERSLVYYYNMKSPMNLKLHRRKTTREYRVSQFEHSNS SINNGYPVSNNMVSEIPNCPSSVKLLVEPAVDNVQVDKTNGYTKLRNNDVYFPTSFSDICQPLSKNDMTLLKNSFLSKSD NLETMSSAKNNTFKVSSYKDNIDSFLFGRIDSHESIKYSDNGAELLLTIFIRERFIFAIFAMYFDSRI |
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