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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_14230.1_25277
Locus scaffold14230.1 : 6219 ... 16700 : -
To GenomeBrowser scaffold14230.1:6219..16700
Genes list of scaffold scaffold14230.1
Synonym pfu_aug2.0_380.1_00671

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_14230.1_25277.t1 1 1 CEP76-C2 81 224 1.80067e-42 144.5 0.0 2.40042e-42 144.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_14230.1_25277.t1 gi|291231014|ref|XP_002735457.1| PREDICTED: centrosomal protein of 76 kDa [Saccoglossus kowalevskii] 0.0

Transcript
Transcript IDpfu_aug1.0_14230.1_25277.t1
Definition-
>pfu_aug1.0_14230.1_25277.t1
atggatgtccagaaccgtatcagagatatcctatcacagaccatacagcaggattacctaggtcagaacggggacgtatc
agaacaagacattttacagaagctgagacagcagggagtcgtggacgatcttctacagcagatacagttcagtggaggtc
agcaggcttccggaggtcgacctgcgacacactttgtggacagggaagataaattaacccagcctccagggaggaaagtt
aacatagatccaactcgtcgctatctttactttcaaattaagggaggtaaggcatttttggagcacatagacgagtctga
tccgatgccgggtcaggtgacttcgttcttcacgttccacattcatttccgaggacagaggtttaagtctcgcccgatac
cttgtgcttgtgatcccgagattgacgagggattcttacttgagcttcacaaagatggttcgggagaagcaggaaaaatg
gcagatgctacgacaatgctgtcaatctgcgatcctgtacatgttgtcctgataaagacggagatttcaggggaaaccac
tctggtgtcttctaatttctttgagtggcgtccagttctggtatctaatggagcaagaatgacgatgcttctagaactaa
aaggaacaggcaccaaagccaaaggtgccgtacacacatgggtggtgacggtgtcactcgatggtacagtcaccttctgg
gaaagcctgaatgggcatagaacgtacacagggattgatattttttcatcattgaagaaaaaggatgcaagaatatggaa
agtagatattagtgacgtagtggaaaatctggcatcgattttgaacgtcatacgatga

Protein
Protein IDpfu_aug1.0_14230.1_25277.t1
Definition-
>pfu_aug1.0_14230.1_25277.t1
MDVQNRIRDILSQTIQQDYLGQNGDVSEQDILQKLRQQGVVDDLLQQIQFSGGQQASGGRPATHFVDREDKLTQPPGRKV
NIDPTRRYLYFQIKGGKAFLEHIDESDPMPGQVTSFFTFHIHFRGQRFKSRPIPCACDPEIDEGFLLELHKDGSGEAGKM
ADATTMLSICDPVHVVLIKTEISGETTLVSSNFFEWRPVLVSNGARMTMLLELKGTGTKAKGAVHTWVVTVSLDGTVTFW
ESLNGHRTYTGIDIFSSLKKKDARIWKVDISDVVENLASILNVIR

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