Gene
| Gene Model ID | pfu_aug1.0_14274.1_32428 |
|---|---|
| Locus | scaffold14274.1 : 1574 ... 5795 : - |
| To GenomeBrowser | scaffold14274.1:1574..5795 |
| Genes list of scaffold | scaffold14274.1 |
| Synonym | pfu_aug2.0_1555.1_18402 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14274.1_32428.t1 | 2 | 1 | zf-C3HC4_2 | 27 | 69 | 3.2e-06 | 27.0 | 3.5e-09 | 3.2e-06 | 27.0 |
| pfu_aug1.0_14274.1_32428.t1 | 2 | 1 | zf-C3HC4 | 27 | 69 | 3.3e-06 | 26.6 | 3.5e-09 | 3.3e-06 | 26.6 |
| pfu_aug1.0_14274.1_32428.t1 | 2 | 1 | zf-B_box | 101 | 133 | 7.7e-10 | 38.5 | 1.1e-07 | 0.0001 | 22.0 |
| pfu_aug1.0_14274.1_32428.t1 | 2 | 2 | zf-C3HC4_2 | 105 | 135 | 3.2e-06 | 27.0 | 8.8e-05 | 0.081 | 12.9 |
| pfu_aug1.0_14274.1_32428.t1 | 2 | 2 | zf-C3HC4 | 105 | 135 | 3.3e-06 | 26.6 | 0.012 | 11.0 | 5.7 |
| pfu_aug1.0_14274.1_32428.t1 | 2 | 2 | zf-B_box | 160 | 195 | 7.7e-10 | 38.5 | 2.1e-10 | 1.9e-07 | 30.8 |
| pfu_aug1.0_14274.1_32428.t1 | 6 | 1 | NHL | 180 | 190 | 1.4e-10 | 40.5 | 0.77 | 720.0 | 0.4 |
| pfu_aug1.0_14274.1_32428.t1 | 4 | 1 | SGL | 390 | 433 | 7.8e-07 | 28.7 | 0.069 | 64.0 | 2.8 |
| pfu_aug1.0_14274.1_32428.t1 | 6 | 2 | NHL | 401 | 422 | 1.4e-10 | 40.5 | 6.2e-05 | 0.057 | 13.3 |
| pfu_aug1.0_14274.1_32428.t1 | 6 | 3 | NHL | 437 | 452 | 1.4e-10 | 40.5 | 0.021 | 20.0 | 5.3 |
| pfu_aug1.0_14274.1_32428.t1 | 4 | 2 | SGL | 482 | 532 | 7.8e-07 | 28.7 | 0.02 | 19.0 | 4.5 |
| pfu_aug1.0_14274.1_32428.t1 | 6 | 4 | NHL | 493 | 517 | 1.4e-10 | 40.5 | 0.0075 | 7.0 | 6.8 |
| pfu_aug1.0_14274.1_32428.t1 | 4 | 3 | SGL | 525 | 580 | 7.8e-07 | 28.7 | 1.5e-06 | 0.0014 | 18.1 |
| pfu_aug1.0_14274.1_32428.t1 | 6 | 5 | NHL | 541 | 560 | 1.4e-10 | 40.5 | 0.0014 | 1.3 | 9.1 |
| pfu_aug1.0_14274.1_32428.t1 | 6 | 6 | NHL | 582 | 597 | 1.4e-10 | 40.5 | 0.068 | 63.0 | 3.7 |
| pfu_aug1.0_14274.1_32428.t1 | 4 | 4 | SGL | 585 | 604 | 7.8e-07 | 28.7 | 0.31 | 280.0 | 0.6 |
Transcript
| Transcript ID | pfu_aug1.0_14274.1_32428.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14274.1_32428.t1 atgagcaccattacggaggaagccgacacttaccgaagcgcttcggttctaatgaagactgacaacaattttgattggtg cggcctgtgttacgatgaccataaagatccaaagatgctgccgtgtttccatacttattgttctagatgcttggaatttt acatagaacagactagtgattctaatgcctttttatgcccactttgtaagacgaaagtatgcatcccttctgacggtgct cagggtttcaaatctaacatctacttgaaagcgcttcaggcttctagagatatgacggaagaagaaactgtgtgcgacat ttgcgaggatggtactatcgccgaatatttttgtctggaatgcaaacaaaacttttgcgagaaatgtagagggatgcatc ttaagatgaatgtgtctaaatcacataatttgataaattcaaagaaagtgggcgaaggggacaagtcgcccgcgcagtct ctctgtgatgaacataaacaggaaatcaatctgttttgtcgccagtgcaaagaagcgatttgtgtaacgtgcaagaaaaa caatcacgaattgcattcaacggatgatttgtcgaaatactcgaacgaaactaaaaacgaactgaatgaaaccattaatt ctttaaagagtcatataccggttctgaaggaaagactccaagaagtggaaaattatcagaccggattcaaagtagtgcga gataagatcacaagaaatgttcgtgaaagagcctttgagttgcataaagaaattgacataatatctgagacatttttgaa tgagatagaatctgacataaaactagaggaggatcgaaatctcattttcaggacgaggataacggaagtgctccagtccg tgacctcgcaagtggcggttgcaaaacactgtattgactttggatccgacgcagagattgcccatggacgggaaacagta atatgcgactttgacgaagaaacaattcggttctctgtcgaaaattggcgagacgaaagtaaatcttcaagaagttggaa gttaccgagttcctggcggtcatctgattcgtggaatagctccggtatcgggcggcgtagctgggtttgttgcggattcg atatgcgtttacacctggtccatcgaaggggacatcgtgtgcgtatcatcaaacttggacgtgacgttgacattgattac gttacttctgacgagaaggacaacgtttatgtttcctgccgaaataacaagtgcgtcaagaaattgaataaagatatcag gattcgcgacatggtgattctgaatgattttccacgtgggatcgcattgtctcaaactggagatctgcttatatgtctga cgaagtccaatacgtacgaaaattacaaatctacggacagaaatattgtcgcaaaatattctcgaatgggaagtaaagta attgccgagttcgataaagctaaagcgcacatgaagtatccgcgtcgtatcgccgaaaatttgaacggcgacgtgtatgt gtcggaccacaaagagcaatgcattcacatcctgtcacccgatggaaagatcaaaagacgtttcacgggacccgactctc atccaatcggagagccatgtggaatcacgtgtgatcgttatggaaatgtgatcatcgcagactataaaaataaccatgtt tatttatatgatcaacaaggaaatttcctctctaatttactgacacctaaggacaatatcaaccagccgttttccgtagc tgttgactcagagggattcttatgggtgggtgggggtaatggggccgtttccactttccaatatctttga |
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Protein
| Protein ID | pfu_aug1.0_14274.1_32428.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14274.1_32428.t1 MSTITEEADTYRSASVLMKTDNNFDWCGLCYDDHKDPKMLPCFHTYCSRCLEFYIEQTSDSNAFLCPLCKTKVCIPSDGA QGFKSNIYLKALQASRDMTEEETVCDICEDGTIAEYFCLECKQNFCEKCRGMHLKMNVSKSHNLINSKKVGEGDKSPAQS LCDEHKQEINLFCRQCKEAICVTCKKNNHELHSTDDLSKYSNETKNELNETINSLKSHIPVLKERLQEVENYQTGFKVVR DKITRNVRERAFELHKEIDIISETFLNEIESDIKLEEDRNLIFRTRITEVLQSVTSQVAVAKHCIDFGSDAEIAHGRETV ICDFDEETIRFSVENWRDESKSSRSWKLPSSWRSSDSWNSSGIGRRSWVCCGFDMRLHLVHRRGHRVRIIKLGRDVDIDY VTSDEKDNVYVSCRNNKCVKKLNKDIRIRDMVILNDFPRGIALSQTGDLLICLTKSNTYENYKSTDRNIVAKYSRMGSKV IAEFDKAKAHMKYPRRIAENLNGDVYVSDHKEQCIHILSPDGKIKRRFTGPDSHPIGEPCGITCDRYGNVIIADYKNNHV YLYDQQGNFLSNLLTPKDNINQPFSVAVDSEGFLWVGGGNGAVSTFQYL |
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