Gene
| Gene Model ID | pfu_aug1.0_14294.1_25290 |
|---|---|
| Locus | scaffold14294.1 : 1 ... 11454 : + |
| To GenomeBrowser | scaffold14294.1:1..11454 |
| Genes list of scaffold | scaffold14294.1 |
| Synonym | pfu_aug2.0_324.1_13994 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14294.1_25290.t1 | 1 | 1 | DUF4217 | 15 | 74 | 2.8e-21 | 74.8 | 2.7e-25 | 4.0e-21 | 74.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14294.1_25290.t1 | gi|260803021|ref|XP_002596390.1| | hypothetical protein BRAFLDRAFT_76207 [Branchiostoma floridae] | 6.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_14294.1_25290.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14294.1_25290.t1 agacaactcccaagaacgtatgaggagtcagctacttaccttcagatgtgctttgagaaccatatagtggaacattccaa aatgcatcaattagcaacaaaagcctaccagtctttcatcagagcttatgccacatatccctccagtctgaaatccatat ttcatgtgaaacatctgcacttgggtcaccttgccaagagcttcggtctgagggaggctccagcagatattggcagattt actaagggatataactctaaaggcgctgggtataagttccagcgaccagatgatagaaacagaaaatag |
|
Protein
| Protein ID | pfu_aug1.0_14294.1_25290.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14294.1_25290.t1 RQLPRTYEESATYLQMCFENHIVEHSKMHQLATKAYQSFIRAYATYPSSLKSIFHVKHLHLGHLAKSFGLREAPADIGRF TKGYNSKGAGYKFQRPDDRNRK |
|