Gene
| Gene Model ID | pfu_aug1.0_1430.1_29725 |
|---|---|
| Locus | scaffold1430.1 : 41566 ... 46967 : + |
| To GenomeBrowser | scaffold1430.1:41566..46967 |
| Genes list of scaffold | scaffold1430.1 |
| Synonym | pfu_aug2.0_282.1_07292 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1430.1_29725.t1 | 2 | 1 | TROVE | 9 | 81 | 1.4e-27 | 96.4 | 3.5e-11 | 5.3e-07 | 28.7 |
| pfu_aug1.0_1430.1_29725.t1 | 2 | 2 | TROVE | 149 | 256 | 1.4e-27 | 96.4 | 1.8e-22 | 2.7e-18 | 65.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1430.1_29725.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1430.1_29725.t1 atgctgaacatttgcaaggacgccacgcccacttatttgttcagcttcttgcgcttccggagtaagatatgtggaaatag cggtcggtgggggagaggtttgcggtcagccatctccaagtattacaacggttatagtgcagaccctatgaaactagcct tacacgttacgaaattctataggcgttttggatggagtcatcgagacgtattgcgacttgcgcatgttaagtcacgtgac ttgagaataaattacatcttggcgtacattgcgagaggtttgcgatacgctgacgaaaagtatccgaacacaaatggtga cgatgttttacagcaaataaaggactatataaatgttgtaaccagtgcgcgccgaggtcagtacgaagaagatggactat gtgaacaaattgccttgaaacagctagtccttcaacaaataagtacacaagctttgagatcagccgttgtttgggaaaca ctcctcgtattgatgccgatgaaatgcatgctccggaatctgggaaagatggcgtctctagatatatttgggtataataa acccgcagagaagggagtaatgatgtttctcaggtgtccagagaagatgaaggactcaaaggtccacccaatcgacgtgc ttgtagcccatcaccagtattgccaaggggttagtgggcgtcggcgaatcacatggacaccacgacagacaatcaaagat gagcttgaggaggcgttctttggttactttcgcgatatcgaatctacgggtaaaaattatttgcttgccctggatttggg atgtaaacatacagaactagtcaagggaatatgtggagacttgaatatcggcaaatatatagcatcgctggttctggctc tacacagggtggaaaacaattgtcggaccgtagcatttggtactactgaggtggtatctctcgacattgataataatagc cggatcgacaatatggacaatatttggcaaagaggtattacttttcataactcccgtgtttccactgtgatcaatcatgc cattcgacgtggattaagagttgacattttcgtcatcttttcgggtggcaatgatacagtcctgtcccaagaaccgctac aaagactagaagactatcaagagctagttctcattcttgtgctgtatttacccctgaaatacaatactacatccatatgt tttaagaggagacaaaagtaa |
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Protein
| Protein ID | pfu_aug1.0_1430.1_29725.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1430.1_29725.t1 MLNICKDATPTYLFSFLRFRSKICGNSGRWGRGLRSAISKYYNGYSADPMKLALHVTKFYRRFGWSHRDVLRLAHVKSRD LRINYILAYIARGLRYADEKYPNTNGDDVLQQIKDYINVVTSARRGQYEEDGLCEQIALKQLVLQQISTQALRSAVVWET LLVLMPMKCMLRNLGKMASLDIFGYNKPAEKGVMMFLRCPEKMKDSKVHPIDVLVAHHQYCQGVSGRRRITWTPRQTIKD ELEEAFFGYFRDIESTGKNYLLALDLGCKHTELVKGICGDLNIGKYIASLVLALHRVENNCRTVAFGTTEVVSLDIDNNS RIDNMDNIWQRGITFHNSRVSTVINHAIRRGLRVDIFVIFSGGNDTVLSQEPLQRLEDYQELVLILVLYLPLKYNTTSIC FKRRQK |
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