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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_14304.1_61340
Locus scaffold14304.1 : 14662 ... 17895 : -
To GenomeBrowser scaffold14304.1:14662..17895
Genes list of scaffold scaffold14304.1
Synonym pfu_aug2.0_303.1_10593

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_14304.1_61340.t1 1 1 UbiA 4 139 9.6e-19 67.6 8.0e-23 1.2e-18 67.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_14304.1_61340.t1 gi|195438026|ref|XP_002066938.1| GK24744 [Drosophila willistoni] 0.0

Transcript
Transcript IDpfu_aug1.0_14304.1_61340.t1
Definition-
>pfu_aug1.0_14304.1_61340.t1
atggagcaccttgccgtgatgtactttggaggattgtcgagtagttttctttacactggaggactgggactgaaatatat
cgcccttggagatttattgatttttttcacatttggacctctgacagtaatgttcgctttcctttcgcagacaggaaaat
tgactatgataccagtgctgtatgcattgccgcttgcattaaatacagaggctatcttacacagcaacaacacacgagac
atggattctgatcagcgtgccggcattgttaccatggcaatactacttggaagaactgggtcctacacctttttcaccat
gcttatatttctgccattttttatattcgctttgatgggaatgcactattcattatggatgttactccccatgttgtgta
tatttgaagcttttaacgtagagagagacttccgcaatgacacgttgaagggactacctcagagagtagcaaaaatgaat
ttaattctaggaatcttgtacactgttggttgtatgttagcagacaaatcagcattttccttttaa

Protein
Protein IDpfu_aug1.0_14304.1_61340.t1
Definition-
>pfu_aug1.0_14304.1_61340.t1
MEHLAVMYFGGLSSSFLYTGGLGLKYIALGDLLIFFTFGPLTVMFAFLSQTGKLTMIPVLYALPLALNTEAILHSNNTRD
MDSDQRAGIVTMAILLGRTGSYTFFTMLIFLPFFIFALMGMHYSLWMLLPMLCIFEAFNVERDFRNDTLKGLPQRVAKMN
LILGILYTVGCMLADKSAFSF

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