Gene
| Gene Model ID | pfu_aug1.0_14315.1_54050 |
|---|---|
| Locus | scaffold14315.1 : 7092 ... 17885 : - |
| To GenomeBrowser | scaffold14315.1:7092..17885 |
| Genes list of scaffold | scaffold14315.1 |
| Synonym | pfu_aug2.0_782.1_07881 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | tyrosinase-like protein 16 |
| Description | NCBI BLASTP hit to CAC82191.1 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14315.1_54050.t1 | 3 | 1 | Tyrosinase | 4 | 97 | 5.3e-23 | 82.3 | 3.8e-20 | 1.9e-16 | 60.9 |
| pfu_aug1.0_14315.1_54050.t1 | 3 | 2 | Tyrosinase | 122 | 146 | 5.3e-23 | 82.3 | 2.7e-09 | 1.3e-05 | 25.4 |
| pfu_aug1.0_14315.1_54050.t1 | 3 | 3 | Tyrosinase | 235 | 235 | 5.3e-23 | 82.3 | 0.18 | 870.0 | -0.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_14315.1_54050.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14315.1_54050.t1 atgaccgaatcccgatttgacgtgcttgcttctttccattctggttctacacaatatacagctcacggaggatgtaactt tctcggctggcacagactctacctgctcatgttagaagagagtctgcgccaagtagatccggatgtgacgttaccatatt gggattccgtcctggatatgaatatggggcttgacaattcaaagaactcacttttatggcacgaggactttttcggcagc ggagatcagtttgtgcaaactggaccattcgcaaactgggatactcccataggaaaactatcacggaatgtgggcgtgtc aggaaaactgatggacgagtatgatataggaaacgtcaccaaataaacggcatcacatgaccccgtgtttttcatgcatc acgcgtttatagactttgtgtgggaattgtatcgagagaatgcaaaatttaaagcagtagagcggggagatgctacttat gatattgaacaagactaccctgaacatttcggggatggttatcacgcaccggatcaagatatgggagatatgttcgaagg gaccctgacaataggcatgacaaagaatggatactgcaggtcaaaaaccatcgaagaatatgagtacgacaaagcaaatg gattcaccaccaccactaccacaactaccaccaccacaaccaccaccactaccacaaccaccacaaccacgacaccccca cccaccaccaccacaacgccaccacccaccactaccaccacaccacgcccgacaacacaaccacccactaccaccacaca gcgaccctgccccacgctgccaccatcaaaacctccgacaggcggccattacggagataccttcacgaaacctattcaaa attcctactgtgcaaatggtaaaagtgacactaatgaatgggtctatattccggtacgagtcacgatccaaagacctcca gattttaagttttataattcatttccagttagaaatggtcaaccagtcaaaacaaatggcgatatctactcacccaccgg atatggcaaacgagtaagcacttacttacgccccggtaggcctgctaactacgggaactgtaaaagtgcttacagtggcg ctggtgagatctacatccacactatgggactgaattatgatggagactataaggaatatgccattgtggatcacagactt gctatgtcggtctcggtaactcacgtggctatacgagatccgaaagtaggccaatcggacgttttaatttcagcatatga caactgtggccgggtttgtcggccatcttgtctacagcccggaactcaaaacttatataagccttgtaaaggtattataa gagtgacatccagatcaccaaaaatgtacgctaatgactttggtgaatccatcatggacgtatggaacttcactgaattt agagaatgtccccagtttgctactgatcagatttatgtctccttcttttgtgactacaccgataggtatccatgggaggc aatcataaggcaacctggagcacaaataggggccctaacaaccaaaaagaggcttcagattcacatcgacgaagttgatc gagcttatgctataccaaacccccctccgcctccgtga |
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Protein
| Protein ID | pfu_aug1.0_14315.1_54050.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14315.1_54050.t1 MTESRFDVLASFHSGSTQYTAHGGCNFLGWHRLYLLMLEESLRQVDPDVTLPYWDSVLDMNMGLDNSKNSLLWHEDFFGS GDQFVQTGPFANWDTPIGKLSRNVGVSGKLMDEYDIGNVTKXTASHDPVFFMHHAFIDFVWELYRENAKFKAVERGDATY DIEQDYPEHFGDGYHAPDQDMGDMFEGTLTIGMTKNGYCRSKTIEEYEYDKANGFTTTTTTTTTTTTTTTTTTTTTTTPP PTTTTTPPPTTTTTPRPTTQPPTTTTQRPCPTLPPSKPPTGGHYGDTFTKPIQNSYCANGKSDTNEWVYIPVRVTIQRPP DFKFYNSFPVRNGQPVKTNGDIYSPTGYGKRVSTYLRPGRPANYGNCKSAYSGAGEIYIHTMGLNYDGDYKEYAIVDHRL AMSVSVTHVAIRDPKVGQSDVLISAYDNCGRVCRPSCLQPGTQNLYKPCKGIIRVTSRSPKMYANDFGESIMDVWNFTEF RECPQFATDQIYVSFFCDYTDRYPWEAIIRQPGAQIGALTTKKRLQIHIDEVDRAYAIPNPPPPP |
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