Gene
| Gene Model ID | pfu_aug1.0_14318.1_25291 |
|---|---|
| Locus | scaffold14318.1 : 2890 ... 13403 : - |
| To GenomeBrowser | scaffold14318.1:2890..13403 |
| Genes list of scaffold | scaffold14318.1 |
| Synonym | pfu_aug2.0_810.1_01154 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14318.1_25291.t1 | 2 | 1 | I-set | 18 | 98 | 5.7e-21 | 74.1 | 3.1e-11 | 4.2e-08 | 32.9 |
| pfu_aug1.0_14318.1_25291.t1 | 2 | 1 | Ig_2 | 20 | 109 | 8.1e-19 | 67.5 | 1.3e-08 | 1.7e-05 | 24.8 |
| pfu_aug1.0_14318.1_25291.t1 | 2 | 1 | V-set | 22 | 98 | 2.2e-17 | 62.9 | 1.9e-11 | 2.6e-08 | 33.7 |
| pfu_aug1.0_14318.1_25291.t1 | 2 | 1 | ig | 24 | 94 | 5.1e-14 | 52.1 | 5.0e-05 | 0.067 | 13.3 |
| pfu_aug1.0_14318.1_25291.t1 | 2 | 1 | Ig_3 | 27 | 96 | 2.8e-11 | 43.7 | 2.7e-05 | 0.037 | 14.5 |
| pfu_aug1.0_14318.1_25291.t1 | 2 | 2 | I-set | 116 | 196 | 5.7e-21 | 74.1 | 3.3e-13 | 4.4e-10 | 39.2 |
| pfu_aug1.0_14318.1_25291.t1 | 2 | 2 | V-set | 119 | 200 | 2.2e-17 | 62.9 | 3.4e-09 | 4.6e-06 | 26.5 |
| pfu_aug1.0_14318.1_25291.t1 | 2 | 2 | Ig_3 | 119 | 194 | 2.8e-11 | 43.7 | 1.2e-08 | 1.6e-05 | 25.2 |
| pfu_aug1.0_14318.1_25291.t1 | 2 | 2 | Ig_2 | 120 | 204 | 8.1e-19 | 67.5 | 1.5e-13 | 2.0e-10 | 40.6 |
| pfu_aug1.0_14318.1_25291.t1 | 2 | 2 | ig | 125 | 193 | 5.1e-14 | 52.1 | 1.5e-11 | 2.0e-08 | 34.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14318.1_25291.t1 | gi|340729187|ref|XP_003402888.1| | PREDICTED: lachesin-like [Bombus terrestris] | 3.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_14318.1_25291.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14318.1_25291.t1 atatagcgctttgccaacttgcagcggaggcggagtttgttgacatgcagctcaattatacatatgatcagggtgatctc gccacattgtactgcagggtgaataacctcggcaaaagatcggttatatggcgcagaacctcccaacccagtcccatttc agttggtactgacatattcgctcccgatgatagataccacgtacaacacttaccataccggggcaactggaacttgttga tcaagaacgtcaatgccagagattctggcgtgtacgagtgccaaataagtgctaaagagagggcgggatccagacgattg gttctattgaatgttattgaaatacaaatttcgggtacaacatttgtagaaataggtagtaccatcacactaacttgcaa cgcctcctctatggactttccgtccgatgaaattgattggtttagagacggacatcctctaaaagacaatttcaaaattc aaatttccaaacatgtatttcttgttggaaagtcaatacatagtgttttgacggtaaaggaagcaacattaaaggacgct gggacttatgtatgccaggcttcagaccgtcaaattaccagcaccaaagtccatgttctcagtgcacgctcccaaaattc aaaacgaggcacagataacaagggttcttcctcaagaaagggctttaattcgaacattgcatatccactgaaacattcat tttgtactatagtgatatccctattgttagtttcgtataacctacatcgaagaacttga |
|
Protein
| Protein ID | pfu_aug1.0_14318.1_25291.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14318.1_25291.t1 IALCQLAAEAEFVDMQLNYTYDQGDLATLYCRVNNLGKRSVIWRRTSQPSPISVGTDIFAPDDRYHVQHLPYRGNWNLLI KNVNARDSGVYECQISAKERAGSRRLVLLNVIEIQISGTTFVEIGSTITLTCNASSMDFPSDEIDWFRDGHPLKDNFKIQ ISKHVFLVGKSIHSVLTVKEATLKDAGTYVCQASDRQITSTKVHVLSARSQNSKRGTDNKGSSSRKGFNSNIAYPLKHSF CTIVISLLLVSYNLHRRT |
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