Gene
| Gene Model ID | pfu_aug1.0_14347.1_46745 |
|---|---|
| Locus | scaffold14347.1 : 1 ... 20345 : - |
| To GenomeBrowser | scaffold14347.1:1..20345 |
| Genes list of scaffold | scaffold14347.1 |
| Synonym | pfu_aug2.0_19.1_29993 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14347.1_46745.t1 | 6 | 1 | ShK | 110 | 145 | 5.6e-21 | 74.6 | 4.8e-07 | 0.0072 | 16.6 |
| pfu_aug1.0_14347.1_46745.t1 | 6 | 2 | ShK | 154 | 190 | 5.6e-21 | 74.6 | 7.1e-10 | 1.1e-05 | 25.7 |
| pfu_aug1.0_14347.1_46745.t1 | 6 | 3 | ShK | 205 | 238 | 5.6e-21 | 74.6 | 0.00024 | 3.5 | 8.0 |
| pfu_aug1.0_14347.1_46745.t1 | 6 | 4 | ShK | 247 | 283 | 5.6e-21 | 74.6 | 1.7e-08 | 0.00025 | 21.3 |
| pfu_aug1.0_14347.1_46745.t1 | 6 | 5 | ShK | 824 | 862 | 5.6e-21 | 74.6 | 3.6e-06 | 0.053 | 13.8 |
| pfu_aug1.0_14347.1_46745.t1 | 6 | 6 | ShK | 872 | 908 | 5.6e-21 | 74.6 | 2.6e-08 | 0.00039 | 20.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_14347.1_46745.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14347.1_46745.t1 atgttcaattttgtgctctattctcgtaaaacagttccccatggtcgccatagcactttcgatatagacttggcctcaga caatgcatttgtcttatatattgatttcatttcgatgcgtgtacatcgacggcaggtgcggctagccaagaggggatgct tactcctcccgggcacctggtcccacctctcgcttgcgtccgtcagtgttcaattttgtgctctatccgctcctcagaaa agacagacgcagccagtgtttaatttattcttcggaaccgctgcccccacacctcaggcctacgtaaacaatggacaacc cgatccaaattgtaaagacaaactggacaactgtgtacagttcggacaaacatcttgtaaagaaccttacttacaatggg ctaaagattattgtccggcttactgtggcatctgtacacctgtcccgaccgctccaaaaccatgcgtggacaaactgagt gattgtagttcctacgggcaaagagtctgtactgattcaaagtatgagccatgggtcaatgaaaattgccgatatttctg caaaaagtgtggtactggtgttgtttatacgactactacaatagcaccagaaaactgcgttgacaaactggaatgcaaaa attacggaaaggctgcatgtactcaatacgagagctgggcacgggacaattgtaagaactactgcgagttctgcaaaggt aaacccactccacctactccatgtgtggacaaaatccctaattgtgatcgatatgatcccaaatcatgtactgacgaaaa atacagaccgtgggcagaggaaaattgtcgtcaacattgcaagatctgtactgctctgaaacgacagattttcgccttac cccctggtgttgatgcttccaatggcggtccagtatcctatatgccaaaaactaaagcaccacccaccaccaccaccacg actactactaccaccaccaccaccaccaccatggcccccaccaccacccaggcacctacgaccgaagcccctaccacaac cgaagcacccactacaaccaccaccacccaagcacctacaaccacgcccaaaccaacagaaccaccaaagaaagagtgtt tcttccccatacctccaggatctgaaccaattgattatccaaaccccgtcagtggacccatagatcctcaatgtttcatc aagcccacagagaagcccccagagaccactactacgatggcacccacaacagaaatgccaaacaacacttctggaatgga caactcaacagataacggcaataacacatccggcactgacatgacaaccatgggcccagatacaaactccacgaccgccc ccgccaccacagaaatgcccaccactgaaatgtccactacggaaatgcccaccacagatatgcccaccacggaaatgccc acgactgctatgccagacaacggcactgataacggtaacggtactgatatgggtccttcgaccacgcctcaaccacagcc gtgcggtagcgagccagatgcttgcactcctgcggccacgccttccaccatgaccgttacaacggatatggtctccggaa atggtacagattccggcaatggtacagatagcggaagcggatctgggaccacaagcggtaacggaagcggatctgtgact acaagcggtaacggatcaatgggaggcgccacaacaggaagtggtggatccggcactggaagcggaaatatgggtggtac aactgacagtggaaatatgggtggaaccacagctggtggaaatatgggcggatccacatctggtggaaacatgggcggta ccactgctggaggaaatatgggcggaaccaccgctggtggaaacatcggcggtaccactgccggaagcggaagtggatca tctggatcatcaaacggaagcggaaatcaaggcacaacatccggaacgggtggaatccccaccaaggcacccaccaatcc tccagtagtaataagtgtaacagctgcaccgtctgccactaatccccctgtacccacaaaaccagccgcttcccctgcta tgtctaccatgccggacaccactgtagctgtaaccacccccgctgtctccacaaagctagatacgactgtatctattgac accaccactgattccataacaccatctccagatgcatcccaaggtgtacccaccaagatgcctcaaccaacgaaatcctc agctggtaccgctactgtggcagtacccaccaaacctgcttccggaagtggctctacagccggttccggtggcgtcccca ctaaagctccatcatctggctcatcaggaagttccggagccgtaccaacgaagccaagttcttcaggtagcggaggagca actatattgatccctgcaggtacagatctaccaatcgtgaacccaaatgcaaactacacagagagtgctaattgcacgga tgacccaaatattgattgccgactttacaatgctaccaagatctgtgctgatggcagtgtatatcgtccgtggactcttc agcactgtaaacaattctgtggtctaggaaattgcacgaagccaacgttaggaccatgtatagatgagattaacaactgt gatgagtaccaagacgacctctgtactaaccacatattccttctgttcagacagaagaattgtagaaagttctgtggtat atgtgatcaagctgtgtaa |
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Protein
| Protein ID | pfu_aug1.0_14347.1_46745.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14347.1_46745.t1 MFNFVLYSRKTVPHGRHSTFDIDLASDNAFVLYIDFISMRVHRRQVRLAKRGCLLLPGTWSHLSLASVSVQFCALSAPQK RQTQPVFNLFFGTAAPTPQAYVNNGQPDPNCKDKLDNCVQFGQTSCKEPYLQWAKDYCPAYCGICTPVPTAPKPCVDKLS DCSSYGQRVCTDSKYEPWVNENCRYFCKKCGTGVVYTTTTIAPENCVDKLECKNYGKAACTQYESWARDNCKNYCEFCKG KPTPPTPCVDKIPNCDRYDPKSCTDEKYRPWAEENCRQHCKICTALKRQIFALPPGVDASNGGPVSYMPKTKAPPTTTTT TTTTTTTTTTMAPTTTQAPTTEAPTTTEAPTTTTTTQAPTTTPKPTEPPKKECFFPIPPGSEPIDYPNPVSGPIDPQCFI KPTEKPPETTTTMAPTTEMPNNTSGMDNSTDNGNNTSGTDMTTMGPDTNSTTAPATTEMPTTEMSTTEMPTTDMPTTEMP TTAMPDNGTDNGNGTDMGPSTTPQPQPCGSEPDACTPAATPSTMTVTTDMVSGNGTDSGNGTDSGSGSGTTSGNGSGSVT TSGNGSMGGATTGSGGSGTGSGNMGGTTDSGNMGGTTAGGNMGGSTSGGNMGGTTAGGNMGGTTAGGNIGGTTAGSGSGS SGSSNGSGNQGTTSGTGGIPTKAPTNPPVVISVTAAPSATNPPVPTKPAASPAMSTMPDTTVAVTTPAVSTKLDTTVSID TTTDSITPSPDASQGVPTKMPQPTKSSAGTATVAVPTKPASGSGSTAGSGGVPTKAPSSGSSGSSGAVPTKPSSSGSGGA TILIPAGTDLPIVNPNANYTESANCTDDPNIDCRLYNATKICADGSVYRPWTLQHCKQFCGLGNCTKPTLGPCIDEINNC DEYQDDLCTNHIFLLFRQKNCRKFCGICDQAV |
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