Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_14356.1_68735
Locus scaffold14356.1 : 1 ... 9275 : -
To GenomeBrowser scaffold14356.1:1..9275
Genes list of scaffold scaffold14356.1
Synonym pfu_aug2.0_793.1_11185

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_14356.1_68735.t1 2 1 Lectin_C 15 55 2.9e-13 50.3 1.8e-06 0.026 15.1
pfu_aug1.0_14356.1_68735.t1 2 2 Lectin_C 89 148 2.9e-13 50.3 1.5e-12 2.3e-08 34.6

Transcript
Transcript IDpfu_aug1.0_14356.1_68735.t1
Definition-
>pfu_aug1.0_14356.1_68735.t1
atgcaaataatcttttgctcgggaatacccttcgatgaaacaaggacgtgggatagtgcacctggatcggacccctccac
gcatacagactgtggtgtcatgtactccgggggtgtcataggggacgccaaatgttctagacgagccttctatatctgtg
agaaaagttcagacaaagaatacataaatcttggatgtggtccatggcagagagctggtaacaaatgttaccttttcggc
aatggtagatcgttcaacaggagtatggccaggtctaaatgtcagtcagctggtggagatcttctgaaagtggataatgt
tgacgaaaattactggatttcaaatagagagcttggcccctatgggttttggacagggctgacagatgcagcccaagagg
gcacatggctctggacagatggatctaaggccgatacaacaaattatgtgtaa

Protein
Protein IDpfu_aug1.0_14356.1_68735.t1
Definition-
>pfu_aug1.0_14356.1_68735.t1
MQIIFCSGIPFDETRTWDSAPGSDPSTHTDCGVMYSGGVIGDAKCSRRAFYICEKSSDKEYINLGCGPWQRAGNKCYLFG
NGRSFNRSMARSKCQSAGGDLLKVDNVDENYWISNRELGPYGFWTGLTDAAQEGTWLWTDGSKADTTNYV

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495