Gene
| Gene Model ID | pfu_aug1.0_14364.1_03487 |
|---|---|
| Locus | scaffold14364.1 : 1 ... 6530 : + |
| To GenomeBrowser | scaffold14364.1:1..6530 |
| Genes list of scaffold | scaffold14364.1 |
| Synonym | pfu_aug2.0_89.1_30189 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14364.1_03487.t1 | 2 | 1 | NDK | 56 | 133 | 0.0 | 157.6 | 1.7e-25 | 2.5e-21 | 75.9 |
| pfu_aug1.0_14364.1_03487.t1 | 2 | 2 | NDK | 147 | 241 | 0.0 | 157.6 | 1.1e-26 | 1.6e-22 | 79.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14364.1_03487.t1 | gi|29436421|gb|AAH49398.1| | Ndpkz4 protein [Danio rerio] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_14364.1_03487.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14364.1_03487.t1 ttcgatatcaagaaccacagaatgtttctcaaaaagaccaaattggacaacgtaaaagtcgaagatttatacataggaaa tacagtgaacatattgtcaagacagatgaactttgtggactatggagatgaatttacaaaaaacagactaacacacaaaa cagaaagtgctcttctgaactttgtaacgagaggtccagtgatagcatttgagatcatgggtgagtctgtgatacagaag tggagggatttattagggcctaccgactccgcacaggctagacaagacgcccccaactctatcaggtcaagatttggaaa agataagacagagaatgcctgtcatggttcagatagtactgcctcagctataagggagctggaattcttctttcccagca gtggaccctcacgtcaaaacaccgccaaattcacagactgcacatgttgtgttatcaaaccacacgccgtcaaggcaggt caagcaggaaaaatcatacaggccattgcagaagctggttttgagatttcaatgttagaaatgttccacatggagaaagc taatgccgaggagttctatgaagtatacaaatcggtggttcaagaatacggagccatggtttctgaattaacgtcagggc cgtccatcgccatggaaatccgagcacagaatgcaccacaagctttcagggagatggttggaccagccgatcctatgtca agtttgaccttcacattcaaaccccaaaatcaaaggggatctccttttctgatggccaatctatgtgtgaagttttatca gtctaggtcaaggatcactcgagttatagtgtataataaatcaaatatcgatgccatatga |
|
Protein
| Protein ID | pfu_aug1.0_14364.1_03487.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14364.1_03487.t1 FDIKNHRMFLKKTKLDNVKVEDLYIGNTVNILSRQMNFVDYGDEFTKNRLTHKTESALLNFVTRGPVIAFEIMGESVIQK WRDLLGPTDSAQARQDAPNSIRSRFGKDKTENACHGSDSTASAIRELEFFFPSSGPSRQNTAKFTDCTCCVIKPHAVKAG QAGKIIQAIAEAGFEISMLEMFHMEKANAEEFYEVYKSVVQEYGAMVSELTSGPSIAMEIRAQNAPQAFREMVGPADPMS SLTFTFKPQNQRGSPFLMANLCVKFYQSRSRITRVIVYNKSNIDAI |
|