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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_14364.1_03489
Locus scaffold14364.1 : 12934 ... 19115 : -
To GenomeBrowser scaffold14364.1:12934..19115
Genes list of scaffold scaffold14364.1
Synonym pfu_aug2.0_10994.1_16440

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_14364.1_03489.t1 1 1 5_nucleotid 5 109 7.2e-25 87.4 4.8e-29 7.2e-25 87.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_14364.1_03489.t1 gi|291237404|ref|XP_002738625.1| PREDICTED: 5'-nucleotidase domain-containing protein 3-like [Saccoglossus kowalevskii] 2.0e-29

Transcript
Transcript IDpfu_aug1.0_14364.1_03489.t1
Definition-
>pfu_aug1.0_14364.1_03489.t1
atgttagacccgactactcagaatgagtcatatgacagagtttatcgtcttgttcaaggcaaagtctaccaacagggtaa
cttctacatgctgaggcagatgacaggatggtacagctttaatgtattgtattttggagaccatgtttacagtgacttgg
ctgatccctctctaaagagtggatggagaaccggtgctattattccagaattagagaaagaaaccttgattatgaacagt
gcagattatcatactgccgttaattggttggggcaacttgagaatctcatagaaatatctcagatggataaaagtccaga
gaccagttctattcgaaaacagtggttagacgagagacatgaactcaggtaa

Protein
Protein IDpfu_aug1.0_14364.1_03489.t1
Definition-
>pfu_aug1.0_14364.1_03489.t1
MLDPTTQNESYDRVYRLVQGKVYQQGNFYMLRQMTGWYSFNVLYFGDHVYSDLADPSLKSGWRTGAIIPELEKETLIMNS
ADYHTAVNWLGQLENLIEISQMDKSPETSSIRKQWLDERHELR

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