Gene
| Gene Model ID | pfu_aug1.0_1439.1_44030 |
|---|---|
| Locus | scaffold1439.1 : 9623 ... 30405 : - |
| To GenomeBrowser | scaffold1439.1:9623..30405 |
| Genes list of scaffold | scaffold1439.1 |
| Synonym | pfu_aug2.0_3218.1_29056 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | melanocortin-1 receptor |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1439.1_44030.t1 | 1 | 1 | 7tm_1 | 29 | 259 | 2.9e-09 | 36.4 | 1.7e-12 | 2.6e-08 | 33.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1439.1_44030.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1439.1_44030.t1 atggatgtaccgagacacgaattagacgcagattttatcgctgaaatcgctattgggaccgtcttactggccggaggttg tgtaggaaacgctttgaccgtccattttataagaaagaaccatgaactacatgctccaacttttgtacttattgcctgtt tggcctgtacggacatttctgctcttatatccaggtatttatttttgacttttgatttggttctctcgtatgctcctgat ggaataattaactttgtggtggtatttggtctggcggcactacacagctcaaatatgcatatagtgattttagctcacct gcgatataagcttatcgtgtaccctttacacacagtggacgtacgactacggacaatttacagaaacagcgctatcgctt ggatagtcagtattctagtggctctgtgtttagaacttccaatgataataggtgtggacgaccaggttgcttacatcatc acagtctgtaacggattttacctcttactgagcaccttaattcccatcctatggttccacttctataaagtgaaggctct gaggagctcaaccgccattcccagtggaggccatgacgtcacagggatgatgtcggtgatggtgaccttgattctgacct cccaagtggttgccatagtgccgttagtgacagcatcagtgactatgtcgtttatagacgatatacatttacgaaatgtt ctaggaaatacagctcattgtttcctgttactgaaccatagcattaatcctgtgttatttttctatttctctaaatttag gagaagaaacatagatgagacaatgcatacctactggttgattgatggaataaaacgtaaaacgataaataaaaagcaac atatgatttatgactttgatactatcatagataagacatcagctgttgaaatgagcatatgaatcatcaaacgcctttta taccgtggatatgatcctaatgtcaccagacggacactaggcttggcacttgaccaatctacggtcttgtacaagcgcat tcttaaaacttgcactctgactgactgtgacgacgggactccatga |
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Protein
| Protein ID | pfu_aug1.0_1439.1_44030.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1439.1_44030.t1 MDVPRHELDADFIAEIAIGTVLLAGGCVGNALTVHFIRKNHELHAPTFVLIACLACTDISALISRYLFLTFDLVLSYAPD GIINFVVVFGLAALHSSNMHIVILAHLRYKLIVYPLHTVDVRLRTIYRNSAIAWIVSILVALCLELPMIIGVDDQVAYII TVCNGFYLLLSTLIPILWFHFYKVKALRSSTAIPSGGHDVTGMMSVMVTLILTSQVVAIVPLVTASVTMSFIDDIHLRNV LGNTAHCFLLLNHSINPVLFFYFSKFRRRNIDETMHTYWLIDGIKRKTINKKQHMIYDFDTIIDKTSAVEMSIXIIKRLL YRGYDPNVTRRTLGLALDQSTVLYKRILKTCTLTDCDDGTP |
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