Gene
Gene Model ID | pfu_aug1.0_1439.1_44030 |
---|---|
Locus | scaffold1439.1 : 9623 ... 30405 : - |
To GenomeBrowser | scaffold1439.1:9623..30405 |
Genes list of scaffold | scaffold1439.1 |
Synonym | pfu_aug2.0_3218.1_29056 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | melanocortin-1 receptor |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1439.1_44030.t1 | 1 | 1 | 7tm_1 | 29 | 259 | 2.9e-09 | 36.4 | 1.7e-12 | 2.6e-08 | 33.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
Dshape | 1 |
Transcript
Transcript ID | pfu_aug1.0_1439.1_44030.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1439.1_44030.t1 atggatgtaccgagacacgaattagacgcagattttatcgctgaaatcgctattgggaccgtcttactggccggaggttg tgtaggaaacgctttgaccgtccattttataagaaagaaccatgaactacatgctccaacttttgtacttattgcctgtt tggcctgtacggacatttctgctcttatatccaggtatttatttttgacttttgatttggttctctcgtatgctcctgat ggaataattaactttgtggtggtatttggtctggcggcactacacagctcaaatatgcatatagtgattttagctcacct gcgatataagcttatcgtgtaccctttacacacagtggacgtacgactacggacaatttacagaaacagcgctatcgctt ggatagtcagtattctagtggctctgtgtttagaacttccaatgataataggtgtggacgaccaggttgcttacatcatc acagtctgtaacggattttacctcttactgagcaccttaattcccatcctatggttccacttctataaagtgaaggctct gaggagctcaaccgccattcccagtggaggccatgacgtcacagggatgatgtcggtgatggtgaccttgattctgacct cccaagtggttgccatagtgccgttagtgacagcatcagtgactatgtcgtttatagacgatatacatttacgaaatgtt ctaggaaatacagctcattgtttcctgttactgaaccatagcattaatcctgtgttatttttctatttctctaaatttag gagaagaaacatagatgagacaatgcatacctactggttgattgatggaataaaacgtaaaacgataaataaaaagcaac atatgatttatgactttgatactatcatagataagacatcagctgttgaaatgagcatatgaatcatcaaacgcctttta taccgtggatatgatcctaatgtcaccagacggacactaggcttggcacttgaccaatctacggtcttgtacaagcgcat tcttaaaacttgcactctgactgactgtgacgacgggactccatga |
Protein
Protein ID | pfu_aug1.0_1439.1_44030.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1439.1_44030.t1 MDVPRHELDADFIAEIAIGTVLLAGGCVGNALTVHFIRKNHELHAPTFVLIACLACTDISALISRYLFLTFDLVLSYAPD GIINFVVVFGLAALHSSNMHIVILAHLRYKLIVYPLHTVDVRLRTIYRNSAIAWIVSILVALCLELPMIIGVDDQVAYII TVCNGFYLLLSTLIPILWFHFYKVKALRSSTAIPSGGHDVTGMMSVMVTLILTSQVVAIVPLVTASVTMSFIDDIHLRNV LGNTAHCFLLLNHSINPVLFFYFSKFRRRNIDETMHTYWLIDGIKRKTINKKQHMIYDFDTIIDKTSAVEMSIXIIKRLL YRGYDPNVTRRTLGLALDQSTVLYKRILKTCTLTDCDDGTP |