Gene
Gene Model ID | pfu_aug1.0_144.1_22029 |
---|---|
Locus | scaffold144.1 : 51626 ... 72344 : + |
To GenomeBrowser | scaffold144.1:51626..72344 |
Genes list of scaffold | scaffold144.1 |
Synonym | pfu_aug2.0_131.1_03685 |
Manual annotation
Study field | Environmental Response |
---|---|
Gene name | calcitonin-like receptor |
Description | 7tm_2 domain |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_144.1_22029.t1 | 2 | 1 | 7tm_2 | 115 | 237 | 5.5e-23 | 81.3 | 1.6e-22 | 2.4e-18 | 66.1 |
pfu_aug1.0_144.1_22029.t1 | 2 | 2 | 7tm_2 | 238 | 287 | 5.5e-23 | 81.3 | 3.8e-08 | 0.00056 | 19.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_144.1_22029.t1 | gi|60729677|pir||JC8022 | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues | |
mantle | 2 |
Transcript
Transcript ID | pfu_aug1.0_144.1_22029.t1 |
---|---|
Definition | - |
>pfu_aug1.0_144.1_22029.t1 atgacatggaacagtaaacgcggcaccaaacatcaaacacaactgaccacacttaaaccaacaacactcatgggcaatcg ttgccgatttaggacggtcatctgcgatgttagtagcagatggtgtggttatccgaaatacgtgcgcaaaatccttccaa ttttctggtcaccaaaggttctcattttcacggatgacggtcccggatgcagtatcgacaaaaagaccacggattgcgtc caatttattgtaatccgtgtgtcactacgggcaagcagtaaaaacttgtctngtctaatggaagttggattggtcgtaca gattacacaccgtgttcaaactataatattgttgagaaaacagcacaggatccggcttcatgtcaatctgttcatagctc tacttctgaaggagctgatgaccgttctctgggacatgttagtaacgtatgataaactgaagaatgaagaagtattcgac acagtattgatgaaaaatgaggttggttgtaaaattctgatgtttctgaaactctacttcaactgctgttgttttacctg gatgttttgtgaggggttctatctacacagactgatgagtaacgccttctctcctcccagatctcttattcccgtctatc ttgctggttggttacttccccttactacatctaccctctacagcatattacggggaatctacgcaaacgacagacgagct gtaaaggcaacattcgtattgatacctttatttggagtccagttatttgtcacagcgtatagagttccaacgacagtacc aggaggcctagaatatgaaagattttcgatgatcgtcaacaatttacagggctttctcgtcgcattggtgttctgctttc ttaatggagaagtattatcacaaataagacgatcagtccgtcggcgaattcgagacagatttggaacttcaagaaggatg aataacacactaaaccaaaccctatcaatgagatccgaatatgacggacaacgattttcggaaacacatagctcattatt gcagacgaataaccacaaaaaggattgtataccactagatgaaaaatataacgaaaagtgtaaaagttgtgaccttaatt atcaaagctcaagtgacgaatctcgacatccatttgtttga |
Protein
Protein ID | pfu_aug1.0_144.1_22029.t1 |
---|---|
Definition | - |
>pfu_aug1.0_144.1_22029.t1 MTWNSKRGTKHQTQLTTLKPTTLMGNRCRFRTVICDVSSRWCGYPKYVRKILPIFWSPKVLIFTDDGPGCSIDKKTTDCV QFIVIRVSLRASSKNLSXLMEVGLVVQITHRVQTIILLRKQHRIRLHVNLFIALLLKELMTVLWDMLVTYDKLKNEEVFD TVLMKNEVGCKILMFLKLYFNCCCFTWMFCEGFYLHRLMSNAFSPPRSLIPVYLAGWLLPLTTSTLYSILRGIYANDRRA VKATFVLIPLFGVQLFVTAYRVPTTVPGGLEYERFSMIVNNLQGFLVALVFCFLNGEVLSQIRRSVRRRIRDRFGTSRRM NNTLNQTLSMRSEYDGQRFSETHSSLLQTNNHKKDCIPLDEKYNEKCKSCDLNYQSSSDESRHPFV |