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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1442.1_22598
Locus scaffold1442.1 : 101113 ... 104655 : -
To GenomeBrowser scaffold1442.1:101113..104655
Genes list of scaffold scaffold1442.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1442.1_22598.t1 1 1 Hormone_recep 12 123 4.2e-08 32.5 6.4e-12 4.7e-08 32.3

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
mantle 1

Transcript
Transcript IDpfu_aug1.0_1442.1_22598.t1
Definition-
>pfu_aug1.0_1442.1_22598.t1
atgaaccgagctgtggatcctgaccttgagatgtggatggtttggtgtggagacgtgttggacgtcaatagatcttggat
gtttggaagcatggaaaacaggaaaaagtggttctcattggctaaggaaacacgtgatctcaatctgtctactgaagaga
tggccgtcgtcatgggaatgtctttgacgtttacagatcgctgcagcctatgtcagccaatggaagttgacaagattaat
ttgaatctgacagatcaccttcagacactgttaaaggaacgatataaagttaaagctagcagccagctctgtaaaatcat
ggaattattcgttaatttgaggtcgttttcacatgaaagggacgcccaactgaaagcatttgtctcaaatgaagtagtga
aaacccactttccaaaccttagacgtcttcaagcgttagtgatagagtga

Protein
Protein IDpfu_aug1.0_1442.1_22598.t1
Definition-
>pfu_aug1.0_1442.1_22598.t1
MNRAVDPDLEMWMVWCGDVLDVNRSWMFGSMENRKKWFSLAKETRDLNLSTEEMAVVMGMSLTFTDRCSLCQPMEVDKIN
LNLTDHLQTLLKERYKVKASSQLCKIMELFVNLRSFSHERDAQLKAFVSNEVVKTHFPNLRRLQALVIE

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