Gene
| Gene Model ID | pfu_aug1.0_14461.1_32454 |
|---|---|
| Locus | scaffold14461.1 : 17325 ... 29070 : - |
| To GenomeBrowser | scaffold14461.1:17325..29070 |
| Genes list of scaffold | scaffold14461.1 |
| Synonym | pfu_aug2.0_427.1_24013 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14461.1_32454.t1 | 8 | 1 | Spectrin | 12 | 115 | 0.0 | 159.7 | 5.2e-05 | 0.086 | 13.1 |
| pfu_aug1.0_14461.1_32454.t1 | 3 | 1 | DUF869 | 73 | 397 | 2.8e-06 | 25.9 | 0.00011 | 0.18 | 9.9 |
| pfu_aug1.0_14461.1_32454.t1 | 8 | 2 | Spectrin | 121 | 221 | 0.0 | 159.7 | 1.4e-10 | 2.3e-07 | 31.0 |
| pfu_aug1.0_14461.1_32454.t1 | 8 | 3 | Spectrin | 229 | 330 | 0.0 | 159.7 | 3.1e-07 | 0.00051 | 20.2 |
| pfu_aug1.0_14461.1_32454.t1 | 8 | 4 | Spectrin | 338 | 432 | 0.0 | 159.7 | 6.5e-14 | 1.1e-10 | 41.7 |
| pfu_aug1.0_14461.1_32454.t1 | 3 | 2 | DUF869 | 395 | 597 | 2.8e-06 | 25.9 | 0.0074 | 12.0 | 3.9 |
| pfu_aug1.0_14461.1_32454.t1 | 8 | 5 | Spectrin | 439 | 541 | 0.0 | 159.7 | 2.5e-11 | 4.1e-08 | 33.4 |
| pfu_aug1.0_14461.1_32454.t1 | 8 | 6 | Spectrin | 549 | 648 | 0.0 | 159.7 | 0.0074 | 12.0 | 6.2 |
| pfu_aug1.0_14461.1_32454.t1 | 3 | 3 | DUF869 | 567 | 824 | 2.8e-06 | 25.9 | 8.5e-06 | 0.014 | 13.6 |
| pfu_aug1.0_14461.1_32454.t1 | 8 | 7 | Spectrin | 655 | 756 | 0.0 | 159.7 | 1.3e-08 | 2.2e-05 | 24.6 |
| pfu_aug1.0_14461.1_32454.t1 | 8 | 8 | Spectrin | 772 | 854 | 0.0 | 159.7 | 3.1e-08 | 5.1e-05 | 23.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14461.1_32454.t1 | gi|195576696|ref|XP_002078211.1| | GD23325 [Drosophila simulans] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_14461.1_32454.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14461.1_32454.t1 atgttagctcgttctgagcagtgtgttgctcagcatcaggcgtaccatgacacctgtaacagcttctcccagtggctcag aacatcacgggaaaaactgtcaacctgttccgacacgtacggagaaaaatctgcaatagtgtccaaaatagagagagcta aggctctgacagctaaccttggagagggtgtagagaaactgaccgatgccacgaaggcaggggaggctactctgccaacg acctcacccacgggacagaccaaaatacggacagaattaggtgctatgaaacgagactttgaggaatatagaaccatggt aacggaggcacaggacgacctagaaaggtgcctgtcacgcttgaatgactttgaagaaagttataaccaatttaacgctt ggttgaaggacactgaaaatttcctacgagccgatctggaattgaagtcttcattagaggagaagaaaaaacactgggaa cagtaccagaactacttggatgaggtgctagcccaccagagttctttggaccgagtcaatgaaagagctcaggctttgtt acagacaaatgctgatgctaaaacatctcatgccatcacccaactaaccactcgttaccaaggggtcattacaatggcca aggacattgttaagaatttggagatctacttctcccatcacatgaactacaaccagagctacacagagttccaggactgg ctgacagaaaccaaacagagactgagaaacattcatgactcgtctggtacaaaggacgacgtcggcggaaaactggctaa acttaccgaactacaggcagcaatggatttaggccataatttcctgaggagtttgttggaaagctccgagcgtacgcttc ccaacacgtccccgcgaggatgtcagacaatacgccaggaaacagaacacgctaaacaggaatacgagaacctgttaacg gacgtgtcacagggaaagaggagtctggaaatggctctatcacagtggggagacttcgacagaaattacgaccagttctg tagctggctgtctgatgtggaaaataaactcagacaagaccctgatgccagagctgatctaccagaaaaacgatcaagct tggaaaaatacaaggctttacaagctgatattgcagcacacaaagaggtccttgacaaactagaagaaaaggccgaccat ctcaaagacggcagacccagatcgttagtggctgatctacggtccaggtactctaaactcaacactgctgctaaagacat gatgggcaagctggaggaccaagttcaaggtcacgaggagtatagacgggcttatatagcttgcctggactggcttgcta ataatagacatcgtttacaacgacttagtgactactcaggggataggaagatcctacaagacagactacaacaactcaag gactttaaaggagagatgaggcagggtcaggacatggtaaacaatgccacccagcttggtgagagggtgtgttccaccac cgcccccaggggtcaggaggctatacacaaggaaatacagaacctcaaagatgactggaacacgtttgcgtcctctgtta acgagatggaggctaacttggaggcgtgtatcggtaactgggaagatctggatgaagagtatcagaggttcttacagtgg gtagagaaaatggagggacgtgtgaaaggtctgatggagaataaacccgaccaacaacggaaacagcagcagttcatgga aggagaggacgtatttgatgaaatcttgaagaagaagttatcattagagcatgtaaaggagagaagtgatgctgtgggtc agagaagcagtgatccacgactctctaacaacatgatgcagctatccaccaaataccatagtctggtatcccaagccaag aacatggtacagaaattatcagagaatgcacgtgaccacaaggcctataacgacgcttttgatgcagcagccagatggtt ggcagacatggatgagagagtccaggagtgtaacgatacgtctggtgactggcacactatacaggaacgcatggaagata tcaaggacattaccaatagcatggatgaaggtctacagaaagtcaacttggtctgtgatctggctgagaaaatcctacca aacacctcatctgaaggtaaacggctcatcgaacagcaagtaacggaactgaccaatgaatgggagaagcttaaccttgc catatcagagtgcagcacgatgctcgagggcgtacaggatcgatggaacgattacgaggaatactacggtagcttggtta aatggctggcggacatggagagcacgctgatggcagagcctgaacccaaagcacaacttgtggaaaagaaaacgcagcta gacaaatataagttgatgttgagtgacgtagagaaccatcatcgtctagtgaatgagctcgcagagagagtagccaacct ggaagctctcagtgagaaccctgatgtagctgactcgctagccgacgtacagaatcgctacgacagagtccgtaatagag ccaggttgtttgaagagacacaatatggttctgcattgtgtcaatag |
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Protein
| Protein ID | pfu_aug1.0_14461.1_32454.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14461.1_32454.t1 MLARSEQCVAQHQAYHDTCNSFSQWLRTSREKLSTCSDTYGEKSAIVSKIERAKALTANLGEGVEKLTDATKAGEATLPT TSPTGQTKIRTELGAMKRDFEEYRTMVTEAQDDLERCLSRLNDFEESYNQFNAWLKDTENFLRADLELKSSLEEKKKHWE QYQNYLDEVLAHQSSLDRVNERAQALLQTNADAKTSHAITQLTTRYQGVITMAKDIVKNLEIYFSHHMNYNQSYTEFQDW LTETKQRLRNIHDSSGTKDDVGGKLAKLTELQAAMDLGHNFLRSLLESSERTLPNTSPRGCQTIRQETEHAKQEYENLLT DVSQGKRSLEMALSQWGDFDRNYDQFCSWLSDVENKLRQDPDARADLPEKRSSLEKYKALQADIAAHKEVLDKLEEKADH LKDGRPRSLVADLRSRYSKLNTAAKDMMGKLEDQVQGHEEYRRAYIACLDWLANNRHRLQRLSDYSGDRKILQDRLQQLK DFKGEMRQGQDMVNNATQLGERVCSTTAPRGQEAIHKEIQNLKDDWNTFASSVNEMEANLEACIGNWEDLDEEYQRFLQW VEKMEGRVKGLMENKPDQQRKQQQFMEGEDVFDEILKKKLSLEHVKERSDAVGQRSSDPRLSNNMMQLSTKYHSLVSQAK NMVQKLSENARDHKAYNDAFDAAARWLADMDERVQECNDTSGDWHTIQERMEDIKDITNSMDEGLQKVNLVCDLAEKILP NTSSEGKRLIEQQVTELTNEWEKLNLAISECSTMLEGVQDRWNDYEEYYGSLVKWLADMESTLMAEPEPKAQLVEKKTQL DKYKLMLSDVENHHRLVNELAERVANLEALSENPDVADSLADVQNRYDRVRNRARLFEETQYGSALCQ |
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