Gene
| Gene Model ID | pfu_aug1.0_144656.1_57239 |
|---|---|
| Locus | scaffold144656.1 : 1 ... 901 : - |
| To GenomeBrowser | scaffold144656.1:1..901 |
| Genes list of scaffold | scaffold144656.1 |
| Synonym | pfu_aug2.0_237.1_23712 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_144656.1_57239.t1 | 2 | 1 | Kelch_4 | 1 | 42 | 7.7e-16 | 57.5 | 7.7e-10 | 1.9e-06 | 27.5 |
| pfu_aug1.0_144656.1_57239.t1 | 3 | 1 | Kelch_3 | 1 | 8 | 5.1e-12 | 45.6 | 0.42 | 1000.0 | 0.0 |
| pfu_aug1.0_144656.1_57239.t1 | 2 | 1 | Kelch_5 | 4 | 34 | 1.2e-06 | 28.2 | 9.8e-05 | 0.24 | 11.3 |
| pfu_aug1.0_144656.1_57239.t1 | 2 | 1 | Kelch_6 | 13 | 42 | 1.3e-11 | 44.1 | 2.0e-07 | 0.00049 | 20.1 |
| pfu_aug1.0_144656.1_57239.t1 | 2 | 1 | Kelch_1 | 13 | 41 | 2.0e-08 | 33.6 | 3.6e-06 | 0.009 | 15.5 |
| pfu_aug1.0_144656.1_57239.t1 | 2 | 1 | Kelch_2 | 13 | 43 | 5.2e-08 | 32.3 | 4.6e-07 | 0.0011 | 18.5 |
| pfu_aug1.0_144656.1_57239.t1 | 3 | 2 | Kelch_3 | 14 | 59 | 5.1e-12 | 45.6 | 6.9e-09 | 1.7e-05 | 24.8 |
| pfu_aug1.0_144656.1_57239.t1 | 2 | 2 | Kelch_5 | 50 | 88 | 1.2e-06 | 28.2 | 7.9e-06 | 0.019 | 14.8 |
| pfu_aug1.0_144656.1_57239.t1 | 2 | 2 | Kelch_4 | 51 | 103 | 7.7e-16 | 57.5 | 6.1e-10 | 1.5e-06 | 27.8 |
| pfu_aug1.0_144656.1_57239.t1 | 2 | 2 | Kelch_6 | 51 | 94 | 1.3e-11 | 44.1 | 4.8e-08 | 0.00012 | 22.0 |
| pfu_aug1.0_144656.1_57239.t1 | 2 | 2 | Kelch_1 | 51 | 94 | 2.0e-08 | 33.6 | 2.4e-06 | 0.0059 | 16.1 |
| pfu_aug1.0_144656.1_57239.t1 | 2 | 2 | Kelch_2 | 51 | 95 | 5.2e-08 | 32.3 | 4.7e-05 | 0.12 | 12.2 |
| pfu_aug1.0_144656.1_57239.t1 | 3 | 3 | Kelch_3 | 61 | 109 | 5.1e-12 | 45.6 | 1.3e-06 | 0.0033 | 17.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_144656.1_57239.t1 | gi|291224202|ref|XP_002732095.1| | 1.99993e-41 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_144656.1_57239.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_144656.1_57239.t1 atgggacacactgctacatacgatcctaaattacgatgtatttacgtctttggaggctccaaaaacttacagtggttcca tgatgttcacatgttagacattgatgaattgaaatggcaattgctgaaagttgcaggaaaagcccctaccagagcatacc atagcgctactttatataggaacgagctgtggatatttggtggtgtttacccacgtcccgacccacagccagacggatgt agtaacgatattcacatctttagtcctgtcatggagaactggtatcaaccaatagtcaagggagataaaccactagcacg ctcagggtaa |
|
Protein
| Protein ID | pfu_aug1.0_144656.1_57239.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_144656.1_57239.t1 MGHTATYDPKLRCIYVFGGSKNLQWFHDVHMLDIDELKWQLLKVAGKAPTRAYHSATLYRNELWIFGGVYPRPDPQPDGC SNDIHIFSPVMENWYQPIVKGDKPLARSG |
|