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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_14470.1_39618
Locus scaffold14470.1 : 12566 ... 18976 : +
To GenomeBrowser scaffold14470.1:12566..18976
Genes list of scaffold scaffold14470.1
Synonym pfu_aug2.0_3801.1_05895

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_14470.1_39618.t1 gi|242007939|ref|XP_002424772.1| conserved hypothetical protein [Pediculus humanus corporis] 3.0e-38

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_14470.1_39618.t1
Definition-
>pfu_aug1.0_14470.1_39618.t1
atggcaggtagaagtaatccgagggacatcctgtgttttcagcattgtgatcgacacatcaatatactgtgctttgccgt
gccagaagtatgtcccatctgtcgacgactgaccaatgaaacgccgtgtaggattccgccatatgtcataccatcaccgt
ttaaacacgcctggagaaatccctgctctgttgtcatcagaccaacgtttggaaccttcctaaaggactaccaaaacagt
ggtgcaaactcattactacatgtaggggtcacagcatccaatggtgcggtatttgactatgacgaggatggggttaacat
aggatctcctacatgggaccaggagtgtatcgtagtagacctgaggaacgaggggctgaaccaggatatgatgagacatt
gggaccaatacctaatttatatgagtaaaagtggcatctggacgcctctcagatatgacacagacagacataactgttat
gattttgtactgacattcctgaagcaagttggattgaactttgaaaattgggcctctcattcaaagttttcctttacgca
gaatcttgttcttcctcacacagcaaaagcgggaaaatacatcacactgtacagaaatatactgaaggacggatatttct
gtcagacgtcccctcaacttcctggcggaatgtga

Protein
Protein IDpfu_aug1.0_14470.1_39618.t1
Definition-
>pfu_aug1.0_14470.1_39618.t1
MAGRSNPRDILCFQHCDRHINILCFAVPEVCPICRRLTNETPCRIPPYVIPSPFKHAWRNPCSVVIRPTFGTFLKDYQNS
GANSLLHVGVTASNGAVFDYDEDGVNIGSPTWDQECIVVDLRNEGLNQDMMRHWDQYLIYMSKSGIWTPLRYDTDRHNCY
DFVLTFLKQVGLNFENWASHSKFSFTQNLVLPHTAKAGKYITLYRNILKDGYFCQTSPQLPGGM

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