Gene
| Gene Model ID | pfu_aug1.0_14471.1_03501 |
|---|---|
| Locus | scaffold14471.1 : 16566 ... 23656 : + |
| To GenomeBrowser | scaffold14471.1:16566..23656 |
| Genes list of scaffold | scaffold14471.1 |
| Synonym | pfu_aug2.0_516.1_20863 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14471.1_03501.t1 | 1 | 1 | Med26 | 7 | 57 | 1.5e-16 | 59.6 | 2.8e-20 | 4.1e-16 | 58.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14471.1_03501.t1 | gi|351712954|gb|EHB15873.1| | Mediator of RNA polymerase II transcription subunit 26, partial [Heterocephalus glaber] | 2.0e-19 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_14471.1_03501.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14471.1_03501.t1 atggcggcagttatggccgtcatcaccatactcgaggattatccaatcaccagagatgcacttgagcaaactaggattgg cagatatgtcaatgaactcaggaaaaagacaaaaaatgaacaattggcaaaacgagcaaagaaacttgtgcgtagttggc aaaaacttattactccatcaacggagaatgtcactgctgttaacggcacgcatggagaacgggtagctcctagtcatccc agtctggcagctctgcagggtaatggttcaaaaccaaacagtcctgccctgtcgtgtaaatcaggatcacctgccagtac ctatagtccacaaatcattaacagatctagtctttcaaaacagcaaatggggtacagacctaatactccgactctccagc aaacaagtccggcacttgtacggtccaaacctaatactccaaaattacaacagtcgcaagttaggagtagacccacaacc cctagtctgtcgcaatattcaaaacaagggccgtcgttaagtcctgccgatcccaaggatcatagtactccaaagtctgt tagttcatctgttgatagtctgaagaaggtttctccagaaactcaatgtgctgcgtctatgtcttctcgtgatctgatta gcaataaaagtagacctaataccccaagtgtttgtagtgaatctatgttagagggcagactctctcgtaacttgtctcaa gaatctttaaataatagtatctcacctgaagctagaattccatgtcaatctcatcattccaaggaggaaaatagtagatc atcattgtctcctagcacacaaacggactcatccttaaatgtgaaaacacacgtggccagtagaaagcgaacaagagatg ggaatcaaaactcttcagcagctcccagtaaacgatctaattctgcaacctttgaaaacgggactgtgaaaaatgtcgca aacggtgcattattctccttatctggtgaaaaggacaccactcacaaaccaaaaatctcgccatcagatggaaaacaaaa tttgccgtccaggcgtaatgcctgcttaaatgtaagcactgaaaagctttcagagaagaatatgaggacaccgaaagtta aaacaacagcacagcttattgctgaattgcaagcaaagagcggaagttcagctattggtagtagtgttatacatcagatt gaaacaaatcaaatagctaaggaaagtgatgagatgccgtctgttctcccaccaggggcacgtccgaaacgtaggcggaa aatgagcgatgtgtcatttgatcagggcactccatcaagacctcatggaaatctaagtcaaaccaaaacggaactcgtag aaaaatttttagagacatccataacccccaatactgcagtagatatgagcccatttaagtacgatatgcccaagtcagaa tctctagagaaggaagataccagcgctgaaatagatgttaccgatagctcaggtggcgatacaagctttagaccgcctga agtaagcagtacagaaccagtggaggaaactgctggtccatctaatgaagaaactaaaaccaaacatgtgactctggaag agttatatagtcaactcccacctatagactacgataatgttaacttagaggatttagagtatgagatgcctgctgcgatt gctgtagatgatgagagagtgagaaatctgcatgaggaccatgtagagagtgtgaatggttgtatggatataaatggtgc ttggcgtgattggacacaaactttaactatagcatcatacgatggggacccgctacatattttgccatacgttcccatag atgattga |
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Protein
| Protein ID | pfu_aug1.0_14471.1_03501.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14471.1_03501.t1 MAAVMAVITILEDYPITRDALEQTRIGRYVNELRKKTKNEQLAKRAKKLVRSWQKLITPSTENVTAVNGTHGERVAPSHP SLAALQGNGSKPNSPALSCKSGSPASTYSPQIINRSSLSKQQMGYRPNTPTLQQTSPALVRSKPNTPKLQQSQVRSRPTT PSLSQYSKQGPSLSPADPKDHSTPKSVSSSVDSLKKVSPETQCAASMSSRDLISNKSRPNTPSVCSESMLEGRLSRNLSQ ESLNNSISPEARIPCQSHHSKEENSRSSLSPSTQTDSSLNVKTHVASRKRTRDGNQNSSAAPSKRSNSATFENGTVKNVA NGALFSLSGEKDTTHKPKISPSDGKQNLPSRRNACLNVSTEKLSEKNMRTPKVKTTAQLIAELQAKSGSSAIGSSVIHQI ETNQIAKESDEMPSVLPPGARPKRRRKMSDVSFDQGTPSRPHGNLSQTKTELVEKFLETSITPNTAVDMSPFKYDMPKSE SLEKEDTSAEIDVTDSSGGDTSFRPPEVSSTEPVEETAGPSNEETKTKHVTLEELYSQLPPIDYDNVNLEDLEYEMPAAI AVDDERVRNLHEDHVESVNGCMDINGAWRDWTQTLTIASYDGDPLHILPYVPIDD |
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