Gene
| Gene Model ID | pfu_aug1.0_14471.1_03502 |
|---|---|
| Locus | scaffold14471.1 : 24061 ... 45085 : - |
| To GenomeBrowser | scaffold14471.1:24061..45085 |
| Genes list of scaffold | scaffold14471.1 |
| Synonym | pfu_aug2.0_516.1_20864 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14471.1_03502.t1 | 3 | 1 | STIL_N | 21 | 204 | 0.0 | 177.6 | 1.8e-34 | 2.6e-30 | 105.4 |
| pfu_aug1.0_14471.1_03502.t1 | 3 | 2 | STIL_N | 201 | 339 | 0.0 | 177.6 | 4.8e-24 | 7.1e-20 | 71.0 |
| pfu_aug1.0_14471.1_03502.t1 | 3 | 3 | STIL_N | 536 | 558 | 0.0 | 177.6 | 0.03 | 440.0 | -0.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14471.1_03502.t1 | gi|219519603|gb|AAI44090.1| | STIL protein [Homo sapiens] | 1.4013e-45 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 23 |
| egg-4cell | 1 |
| 8-16cell | 4 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 4 |
| maleGonad | 3 |
| mantle | 7 |
| mantlePallium | 2 |
| pearlSac | 6 |
Transcript
| Transcript ID | pfu_aug1.0_14471.1_03502.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14471.1_03502.t1 atgcctggacacagtagaccacatgtccattttggacccactactacgcaaaatcaagaatcgcagcaaagaaaaccaaa gttatgtatagcggagaaagtgttacgactagcacagagacatatggatagtttgggagaggagagcagcacctttgcct tacagggctcattaacagtagatgatgatggagaaggagtgacctttgtgttagacagatttgaccctggtgggggtgga ccaatcagcaccaatggtctgaccccgggggatatttctgtgccattccagatgtcgggaaattccaagtctgaaagggg aagcaacttagatgactattataatgcattaaagttactaaaagccaagtgctgcagtaaagacaaaatagaacttagca cattcttactgacaaaaggatggtgcagctactacacaagtggagaaaaaagtgttcatcacttagaatttgatgttgta accatggcaacggaattcaatgtctcacctatttcacctgtacctattgtgcctacagctctgtccaaaaatttgtctgg tccaatgagtatgagccacctacagggggagcctaaaacaggctggataagtgggataccgtacgtgtatagcccgtttg tgtgggcttgtttccttagatttatctacaattccagtattcatgatcgggtatgtacccctcctgaaccttttctgatg gtgctatataacccagtgcattcacgacctgaattctatgaagtttcaacgtcatcgggatctagtaagatggaatttga gctgtattctggttatgaggtggtcagtcttcctaagcacatgtatgcacaccaaggtcatatacggcaaccacaacctc tcagaaatggccagaatgtacacaattttcaacctagtgctcagatgaactctcagccaaatgctaatatgaaccctcat ccaggcactcatatgaactctcaaccaggtgctcatatgatgccatcacaacatactgttgctcacaatgggaattataa caacaatatgcatcctcataacaacgctatgcatcctcagcagatgtttggtagacctagctatccttctccatataact ctgtgggctgtcagtacaatactccaagtaatggtcacatgaggtcttactctggacctgctcttaaccatcccagacat catgaggctcaaataccaaaaactggtggtcaaagacctgcaaggaaagtggctatgtctagtactccagcagcatccca tcaaaatggtacgaacacccatcatcatactggtggcaatgtacacacacaaatgactgctcaacaagctaatatggcgc cagctaatgcagatgtggtcacaccggccagttctctctcaccaagacacaattcctctggatctacaaattctagatca tctggacaggcagactcaactggccgctccagtgatgatagtggtctcagtgtgacaccggaacgacccagaactggaag caaccaagacctgcctcagcagagtaacatggaggagactaagccctctcagttagggaactctgccattaattggaatc aagtccctcctgaagtttatcagctacttcttcagcaagatgctcaactgaaacagctccaagctcaaatacagatgttg attcaaaatcaaacacctgctccctatggtctttcgttaagaaaaagaaaggaaattgatgttttaaagaaaaaacaacc aggagagctacagtctcgtcagagacttctggttatggagacctgcttacttttacgattttggatggatggagaccaaa accctgtggagacgactttcatccccaaaataaactacatgtcaatgatgtttgattctgactctgattgttccatggaa atcaatgccatggccatgaagtacttgaaggatgaacagttaacacagctgaacaaattacaaacacagtcgagactaaa agggatcaaagtaaataaggagaatcagaggttagcaatgctgcgccgcgtactgtccgacggctcagaatcaacaccaa atgtgacaactctgggcatgtcaccgaatgatatgacatttgccacaaggaaatatatggaaaaacacggattactaagt gatagtgatactaacagtacgacaagcactaaagatacttatgatgatagttaccaactgaaaactaactttagtatagc gccagattcccctggtcagattacgcatgaagtgctagagactccaagcactcgtaaatctaggagtccgtttcttgatt ctctcaggagtcaaaacacgtccgcaagcaatgaaaagttatggcctggaaacattttacccatcgagtgcactgtgacc ttgacctacaacttccatacaagaccattcatattgagttntcgcatcggaatagcatcgctgctgtgtgtccgtatttt catgtga |
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Protein
| Protein ID | pfu_aug1.0_14471.1_03502.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14471.1_03502.t1 MPGHSRPHVHFGPTTTQNQESQQRKPKLCIAEKVLRLAQRHMDSLGEESSTFALQGSLTVDDDGEGVTFVLDRFDPGGGG PISTNGLTPGDISVPFQMSGNSKSERGSNLDDYYNALKLLKAKCCSKDKIELSTFLLTKGWCSYYTSGEKSVHHLEFDVV TMATEFNVSPISPVPIVPTALSKNLSGPMSMSHLQGEPKTGWISGIPYVYSPFVWACFLRFIYNSSIHDRVCTPPEPFLM VLYNPVHSRPEFYEVSTSSGSSKMEFELYSGYEVVSLPKHMYAHQGHIRQPQPLRNGQNVHNFQPSAQMNSQPNANMNPH PGTHMNSQPGAHMMPSQHTVAHNGNYNNNMHPHNNAMHPQQMFGRPSYPSPYNSVGCQYNTPSNGHMRSYSGPALNHPRH HEAQIPKTGGQRPARKVAMSSTPAASHQNGTNTHHHTGGNVHTQMTAQQANMAPANADVVTPASSLSPRHNSSGSTNSRS SGQADSTGRSSDDSGLSVTPERPRTGSNQDLPQQSNMEETKPSQLGNSAINWNQVPPEVYQLLLQQDAQLKQLQAQIQML IQNQTPAPYGLSLRKRKEIDVLKKKQPGELQSRQRLLVMETCLLLRFWMDGDQNPVETTFIPKINYMSMMFDSDSDCSME INAMAMKYLKDEQLTQLNKLQTQSRLKGIKVNKENQRLAMLRRVLSDGSESTPNVTTLGMSPNDMTFATRKYMEKHGLLS DSDTNSTTSTKDTYDDSYQLKTNFSIAPDSPGQITHEVLETPSTRKSRSPFLDSLRSQNTSASNEKLWPGNILPIECTVT LTYNFHTRPFILSXRIGIASLLCVRIFM |
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