Gene
| Gene Model ID | pfu_aug1.0_14475.1_61357 |
|---|---|
| Locus | scaffold14475.1 : 1533 ... 16345 : - |
| To GenomeBrowser | scaffold14475.1:1533..16345 |
| Genes list of scaffold | scaffold14475.1 |
| Synonym | pfu_aug2.0_611.1_04402 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14475.1_61357.t1 | 1 | 1 | Ldh_1_N | 183 | 318 | 3.2e-10 | 39.9 | 7.4e-14 | 5.5e-10 | 39.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14475.1_61357.t1 | gi|291241545|ref|XP_002740667.1| | PREDICTED: putative malate dehydrogenase 1B-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_14475.1_61357.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14475.1_61357.t1 atgaacggacatctaccggacgtgaaacggatgaaacggagatgtaacggacagctaccagaggccggttcttatgcgtt gcatatccgttttatccgtttcttttctgttactcgtacggtgaagtctgttacacgaaaatctgactgtccttattatg ctcgggcagaacttcttggtgacaagctcgcccttaacctgccggacttcaaacttcacaagattgttatacaaccggag gaatgggataaatggctgaaggacacatgtaacgctagaggctgggagcacaagaagtctccgttggtgtggagagagtt agtggaccgtggagggaagggagttctgattggtggagctaacgagttccaggaatactcacatggttactatggtatac agtcggctcatatcagctcagatatgcttaaaatggcgtccgagaataaactatacaaggaggcagaaaccaaggaagaa atggagtataaagcacaaagtaacccgctgtatgtctgtattacaaatgcttctagtgccgcatgttactccatgattaa ctctatagctaagggtgatgtatttggacacaatacggaagtagctctcagactgtatgataacgagaacaagatggagg aactaaggggtgtacagatggaggctatggacctagcaaatggaccactcaggatcgtagaggttacctctgatgtcaaa aaagcctttactaattgcgaggctattgttctcttggatgaaattgaaatgaaagacggggaaagtagagaaaattatgt aaaacgagaagtagaacattttgtggagtatgcgaaaataatgaacgatgtagcgaagaaaaatgtgaaggtactagttg taggcagtggacctgttaaccttgatatctacatgatgattcaaagtgcacaaaacattcctaaacagaactttgtgggt atgtcaagattgctagagaaccatgccaagtcagtggtggctgacagactcggtgtaaactctagcggagtcgttgattt gatcatttggggcaatgtgaatggcggaaattacattgacatttcaaattgtcgtgtccatggctatgatggtgccatct ggggaccaccatttttctcactgccagcaaaggagatgatctgggacaagaaatggttagatactgaattcattgaattg atcagaaatcggaaagcaaaagtggaagaattgttaggtcacagagccgcaatgtcacaaggggctattgtagcatcaca actagagcagtggtggaatggatcaccggagggacagatgttctcattggctgtctgctcagatggtacagaatatttta taaaacaaagactttaa |
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Protein
| Protein ID | pfu_aug1.0_14475.1_61357.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14475.1_61357.t1 MNGHLPDVKRMKRRCNGQLPEAGSYALHIRFIRFFSVTRTVKSVTRKSDCPYYARAELLGDKLALNLPDFKLHKIVIQPE EWDKWLKDTCNARGWEHKKSPLVWRELVDRGGKGVLIGGANEFQEYSHGYYGIQSAHISSDMLKMASENKLYKEAETKEE MEYKAQSNPLYVCITNASSAACYSMINSIAKGDVFGHNTEVALRLYDNENKMEELRGVQMEAMDLANGPLRIVEVTSDVK KAFTNCEAIVLLDEIEMKDGESRENYVKREVEHFVEYAKIMNDVAKKNVKVLVVGSGPVNLDIYMMIQSAQNIPKQNFVG MSRLLENHAKSVVADRLGVNSSGVVDLIIWGNVNGGNYIDISNCRVHGYDGAIWGPPFFSLPAKEMIWDKKWLDTEFIEL IRNRKAKVEELLGHRAAMSQGAIVASQLEQWWNGSPEGQMFSLAVCSDGTEYFIKQRL |
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