Gene
| Gene Model ID | pfu_aug1.0_14486.1_03505 |
|---|---|
| Locus | scaffold14486.1 : 5725 ... 16575 : - |
| To GenomeBrowser | scaffold14486.1:5725..16575 |
| Genes list of scaffold | scaffold14486.1 |
| Synonym | pfu_aug2.0_1779.1_31898 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14486.1_03505.t1 | 3 | 1 | WBP-1 | 9 | 17 | 1.9e-07 | 31.1 | 0.31 | 4600.0 | -2.3 |
| pfu_aug1.0_14486.1_03505.t1 | 3 | 2 | WBP-1 | 17 | 127 | 1.9e-07 | 31.1 | 1.3e-11 | 1.9e-07 | 31.1 |
| pfu_aug1.0_14486.1_03505.t1 | 3 | 3 | WBP-1 | 180 | 185 | 1.9e-07 | 31.1 | 0.42 | 6200.0 | -2.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14486.1_03505.t1 | gi|260787755|ref|XP_002588917.1| | hypothetical protein BRAFLDRAFT_89105 [Branchiostoma floridae] | 2.0e-15 |
Transcript
| Transcript ID | pfu_aug1.0_14486.1_03505.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14486.1_03505.t1 atgacctatgagtacagaatttcattttggaacctgtggtatttttgatgtaagagatgttgtggtagttcctgttgcta tgacgacgaccgtcacatgacctatgagtacagaatttcattttggaacctgtggtatttttggtttgttatcctgttta tcttgatgtcctgctttggaggatgtggctattacaaacaacgtcagaggtacgcacaatcacagaacacgtttttcggg tctatcggtagagatcgtagcgctacacacagaaataacggtgccattatagtggatcacacacatcccagttattacgc ctattctggtccgggggccgatatcccagcagaggtcactatgcagcctccgccatattctgaggtggttacacagccag gactttacccagcgaacaaatctgatttacctccatatcctggttttgatacaacccctgtagtgccactagatcagcct cagtcaggtatgccagctagctctacacctgtggtcaatcaagctagtagtacaatgccagcccctccagcctactcaga acaccccaccaatgatagaccagataacaaccagtcaaggccagaaccaaccaatcaaaaccaagcttag |
|
Protein
| Protein ID | pfu_aug1.0_14486.1_03505.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14486.1_03505.t1 MTYEYRISFWNLWYFXCKRCCGSSCCYDDDRHMTYEYRISFWNLWYFWFVILFILMSCFGGCGYYKQRQRYAQSQNTFFG SIGRDRSATHRNNGAIIVDHTHPSYYAYSGPGADIPAEVTMQPPPYSEVVTQPGLYPANKSDLPPYPGFDTTPVVPLDQP QSGMPASSTPVVNQASSTMPAPPAYSEHPTNDRPDNNQSRPEPTNQNQA |
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