Gene
| Gene Model ID | pfu_aug1.0_1449.1_37018 |
|---|---|
| Locus | scaffold1449.1 : 485 ... 22225 : - |
| To GenomeBrowser | scaffold1449.1:485..22225 |
| Genes list of scaffold | scaffold1449.1 |
| Synonym | pfu_aug2.0_2568.1_28865 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1449.1_37018.t1 | 2 | 1 | ABC_membrane | 3 | 207 | 9.0e-32 | 110.5 | 1.2e-35 | 9.0e-32 | 110.5 |
| pfu_aug1.0_1449.1_37018.t1 | 1 | 1 | ABC_tran | 219 | 251 | 4.2e-07 | 30.3 | 9.0e-11 | 6.7e-07 | 29.6 |
| pfu_aug1.0_1449.1_37018.t1 | 2 | 2 | ABC_membrane | 378 | 424 | 9.0e-32 | 110.5 | 0.027 | 200.0 | 1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1449.1_37018.t1 | gi|292611903|ref|XP_002661248.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1449.1_37018.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1449.1_37018.t1 atgacaatcggcatgaggattcgatgctctcttatagcggctatatataaaaaggctctgacactaagttcccaagccaa gaaggctttcaccctaggtgaagtggtcaacctgatgtcagtagactgtcagaggatccaggacacttttacctttgcct ggtcattgatgacgtgtcctgtacaactgaccattggtatttacttactatggggagttttaggtccatcatgtctagcc ggattagctgttttagtgttaatggtaccacttaattcatacatagtggttaaacaacgtaaactgcagtcaaaagttct atttctgaaagggaagagaatcaaactaatgaatgaaattctgaatggaatgaaggtgttaaagatgtacacgtgggagc cgtcgtttcagcagcaggttaacgatatacgagaccaggagttggtgttactgaggaagatagcgtaccttcagggtgga tctaccttctgctggatacttgctccgttcctggtaaccctagcgacctttgtgacctatgtattggtatcagaagacca tttcctcgatgcccgtaaagctttcgtttccttgtccttgtttaatatcctccgcttacccattaacctgatgtcacaaa ccatttctctcatggtacagggtattaatataagtggtggacagaaacagcgagtgagtttagctcgtgccgtgtacagt aactcggatatttacctcatggatgaccctctttctgccgtagattcgcacgtgggaaaacacatctttgaaaaagttat aggtccaaaaggcttgctaaaaaataagacgcgagttttggtgacgcatggtgtacactggttaccaatggtggacgtgg tggttgtgatggtgaacggtcgtatatctgagatgggcacatacaatcagctgatcacacatgacggtccgtttgctcag ttcctgaagcagtacttcatggctgaagaggagagtgaggctgaggaagatccagatattatgagaataaaggagaagat gatggagcagatcaagtggtccgtttttggagactatgctaggagtatgggtacactgatcaccatctttgtcctggtgg tgttctcagcgtaccatgccaccagcgtgtttgctaactactggctgacatactggactgaagacgaattcctgtctaac acctcgaattcacctagtaccgatgagtaccagtcactcagtaactactatctgacagtgtatggtgtactaggtattgt acagggtaagttaacacctcaaattaccaagtaccgataa |
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Protein
| Protein ID | pfu_aug1.0_1449.1_37018.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1449.1_37018.t1 MTIGMRIRCSLIAAIYKKALTLSSQAKKAFTLGEVVNLMSVDCQRIQDTFTFAWSLMTCPVQLTIGIYLLWGVLGPSCLA GLAVLVLMVPLNSYIVVKQRKLQSKVLFLKGKRIKLMNEILNGMKVLKMYTWEPSFQQQVNDIRDQELVLLRKIAYLQGG STFCWILAPFLVTLATFVTYVLVSEDHFLDARKAFVSLSLFNILRLPINLMSQTISLMVQGINISGGQKQRVSLARAVYS NSDIYLMDDPLSAVDSHVGKHIFEKVIGPKGLLKNKTRVLVTHGVHWLPMVDVVVVMVNGRISEMGTYNQLITHDGPFAQ FLKQYFMAEEESEAEEDPDIMRIKEKMMEQIKWSVFGDYARSMGTLITIFVLVVFSAYHATSVFANYWLTYWTEDEFLSN TSNSPSTDEYQSLSNYYLTVYGVLGIVQGKLTPQITKYR |
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