Gene
| Gene Model ID | pfu_aug1.0_14498.1_46763 |
|---|---|
| Locus | scaffold14498.1 : 1807 ... 17406 : - |
| To GenomeBrowser | scaffold14498.1:1807..17406 |
| Genes list of scaffold | scaffold14498.1 |
| Synonym | NA |
Manual annotation
| Study field | other |
|---|---|
| Gene name | calmodulin like |
| Description | Blast best hit to AB063184 (Halichondria okadai) |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14498.1_46763.t1 | 4 | 1 | EF-hand_1 | 1 | 28 | 3.09967e-42 | 138.6 | 8.5e-12 | 5.7e-09 | 34.6 |
| pfu_aug1.0_14498.1_46763.t1 | 4 | 1 | EF-hand_6 | 1 | 29 | 2.2e-31 | 104.8 | 5.4e-12 | 3.6e-09 | 35.7 |
| pfu_aug1.0_14498.1_46763.t1 | 2 | 1 | EF-hand_7 | 2 | 61 | 4.0e-38 | 129.3 | 4.1e-18 | 2.8e-15 | 56.2 |
| pfu_aug1.0_14498.1_46763.t1 | 4 | 1 | EF-hand_5 | 2 | 25 | 1.1e-27 | 94.0 | 1.1e-09 | 7.2e-07 | 28.2 |
| pfu_aug1.0_14498.1_46763.t1 | 2 | 1 | EF-hand_9 | 4 | 63 | 5.7e-15 | 54.9 | 1.4e-11 | 9.5e-09 | 35.0 |
| pfu_aug1.0_14498.1_46763.t1 | 4 | 1 | EF-hand_8 | 5 | 26 | 1.0e-33 | 114.7 | 0.00019 | 0.13 | 11.8 |
| pfu_aug1.0_14498.1_46763.t1 | 2 | 1 | SPARC_Ca_bdg | 5 | 58 | 1.3e-08 | 34.8 | 5.6e-05 | 0.038 | 14.0 |
| pfu_aug1.0_14498.1_46763.t1 | 2 | 1 | EF-hand_4 | 10 | 61 | 2.7e-09 | 36.6 | 0.00017 | 0.12 | 12.1 |
| pfu_aug1.0_14498.1_46763.t1 | 4 | 2 | EF-hand_8 | 13 | 62 | 1.0e-33 | 114.7 | 8.5e-16 | 5.7e-13 | 48.2 |
| pfu_aug1.0_14498.1_46763.t1 | 3 | 1 | UPF0154 | 16 | 45 | 8.9e-07 | 28.4 | 0.00065 | 0.44 | 10.2 |
| pfu_aug1.0_14498.1_46763.t1 | 4 | 2 | EF-hand_1 | 36 | 63 | 3.09967e-42 | 138.6 | 4.4e-12 | 3.0e-09 | 35.5 |
| pfu_aug1.0_14498.1_46763.t1 | 4 | 2 | EF-hand_6 | 37 | 63 | 2.2e-31 | 104.8 | 3.2e-06 | 0.0021 | 17.7 |
| pfu_aug1.0_14498.1_46763.t1 | 4 | 2 | EF-hand_5 | 37 | 61 | 1.1e-27 | 94.0 | 2.3e-07 | 0.00016 | 20.8 |
| pfu_aug1.0_14498.1_46763.t1 | 3 | 2 | UPF0154 | 58 | 81 | 8.9e-07 | 28.4 | 0.11 | 71.0 | 3.1 |
| pfu_aug1.0_14498.1_46763.t1 | 2 | 2 | SPARC_Ca_bdg | 65 | 132 | 1.3e-08 | 34.8 | 1.2e-06 | 0.00078 | 19.4 |
| pfu_aug1.0_14498.1_46763.t1 | 4 | 3 | EF-hand_8 | 69 | 93 | 1.0e-33 | 114.7 | 6.6e-06 | 0.0045 | 16.5 |
| pfu_aug1.0_14498.1_46763.t1 | 2 | 2 | EF-hand_4 | 72 | 134 | 2.7e-09 | 36.6 | 7.9e-08 | 5.3e-05 | 22.8 |
| pfu_aug1.0_14498.1_46763.t1 | 4 | 3 | EF-hand_1 | 73 | 101 | 3.09967e-42 | 138.6 | 6.5e-13 | 4.4e-10 | 38.1 |
| pfu_aug1.0_14498.1_46763.t1 | 4 | 3 | EF-hand_6 | 73 | 102 | 2.2e-31 | 104.8 | 1.9e-12 | 1.3e-09 | 37.1 |
| pfu_aug1.0_14498.1_46763.t1 | 2 | 2 | EF-hand_7 | 74 | 134 | 4.0e-38 | 129.3 | 6.9e-24 | 4.6e-21 | 74.7 |
| pfu_aug1.0_14498.1_46763.t1 | 4 | 3 | EF-hand_5 | 74 | 98 | 1.1e-27 | 94.0 | 5.2e-10 | 3.5e-07 | 29.2 |
| pfu_aug1.0_14498.1_46763.t1 | 2 | 2 | EF-hand_9 | 77 | 135 | 5.7e-15 | 54.9 | 2.2e-06 | 0.0015 | 18.4 |
| pfu_aug1.0_14498.1_46763.t1 | 4 | 4 | EF-hand_8 | 86 | 136 | 1.0e-33 | 114.7 | 5.7e-20 | 3.8e-17 | 61.6 |
| pfu_aug1.0_14498.1_46763.t1 | 3 | 3 | UPF0154 | 89 | 117 | 8.9e-07 | 28.4 | 0.00025 | 0.17 | 11.5 |
| pfu_aug1.0_14498.1_46763.t1 | 4 | 4 | EF-hand_1 | 109 | 136 | 3.09967e-42 | 138.6 | 9.7e-13 | 6.5e-10 | 37.5 |
| pfu_aug1.0_14498.1_46763.t1 | 4 | 4 | EF-hand_5 | 113 | 134 | 1.1e-27 | 94.0 | 1.1e-06 | 0.00076 | 18.7 |
| pfu_aug1.0_14498.1_46763.t1 | 4 | 4 | EF-hand_6 | 115 | 135 | 2.2e-31 | 104.8 | 2.4e-05 | 0.016 | 15.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantle | 2 |
| mantleEdge | 2 |
| mantlePallium | 2 |
Transcript
| Transcript ID | pfu_aug1.0_14498.1_46763.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14498.1_46763.t1 agtttaaggaggcgttcagcttatttgacaaggatggtgatggtacaataacaaccaaggagctcggtactgtgatgagg tcactaggtcagaacccaaccgaggctgaacttcaggatatgatcaacgaagtagacgctgatggaaatggtacaatcga cttcccagaattccttacaatgatgtcgaaaaagatgaaagaatctgactccgaagacgaaattcgagaggcattcaaag tgtttgataaagacggcaatggttttataagtgcagctgaactacgtcacgtgatgacaaatctcggagaaaaactcacg gacgaggaggtagacgagatgatacgagaggcagacattgacggcgatggacaggttaattatgaagaatttgtcaaaat gatgacgtcgaagtga |
|
Protein
| Protein ID | pfu_aug1.0_14498.1_46763.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14498.1_46763.t1 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMSKKMKESDSEDEIREAFKV FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK |
|