Gene
| Gene Model ID | pfu_aug1.0_14511.1_54062 |
|---|---|
| Locus | scaffold14511.1 : 1 ... 19425 : - |
| To GenomeBrowser | scaffold14511.1:1..19425 |
| Genes list of scaffold | scaffold14511.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14511.1_54062.t1 | 1 | 1 | Reprolysin_4 | 137 | 363 | 1.8e-12 | 47.2 | 1.6e-15 | 3.9e-12 | 46.1 |
| pfu_aug1.0_14511.1_54062.t1 | 1 | 1 | Reprolysin_5 | 137 | 336 | 2.3e-10 | 40.7 | 1.7e-13 | 4.2e-10 | 39.8 |
| pfu_aug1.0_14511.1_54062.t1 | 2 | 1 | Reprolysin | 138 | 158 | 5.1e-15 | 55.5 | 0.54 | 1300.0 | -1.3 |
| pfu_aug1.0_14511.1_54062.t1 | 2 | 1 | Reprolysin_2 | 155 | 183 | 8.6e-12 | 45.4 | 0.11 | 260.0 | 1.5 |
| pfu_aug1.0_14511.1_54062.t1 | 2 | 1 | Reprolysin_3 | 167 | 183 | 4.8e-11 | 43.2 | 0.19 | 470.0 | 1.2 |
| pfu_aug1.0_14511.1_54062.t1 | 2 | 2 | Reprolysin_3 | 227 | 318 | 4.8e-11 | 43.2 | 4.7e-14 | 1.2e-10 | 42.0 |
| pfu_aug1.0_14511.1_54062.t1 | 2 | 2 | Reprolysin | 229 | 376 | 5.1e-15 | 55.5 | 6.9e-18 | 1.7e-14 | 53.8 |
| pfu_aug1.0_14511.1_54062.t1 | 2 | 2 | Reprolysin_2 | 261 | 362 | 8.6e-12 | 45.4 | 3.6e-14 | 9.0e-11 | 42.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_14511.1_54062.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14511.1_54062.t1 atgcgtagttggcattttcaaatcacttgcattgttttgtcttcgtttatagttcaaaccaagtttcttactttgcagaa tttcagattttaccatgacccgggaattagggaaacgtccatcattgtccattgcaagacagaccgagggacaatcttaa tttctggaaattttcaacaaaataataaattctacaaattacaacatcatctggaagaggagacaaaatccgtacactac tacatgatcatgggtgacgtcatagctgacagcagcaccaaagaacccttgcatgattatgtttctctgccgacaggatc atcgaatttccatagaaaagagaatgatttattaaaggataactccaacattagacatcgacgtcaagtggacattcaac aaccttacgtcatcgatgtattagtaattatagattacaaaatatatacaaaatggtacgagactacaacaggtgttgca ttagagagagaacaggaaacaaaaactgaaatacatagctatttttcatatttcatgcatgaagtggggctccggtatga aagcattgacagagctgatctgcgatttaaacttaaagttacgagcttcattttagcagatagtcccgacgtgtttttgg taacagaagttctaaaagaaccaaggtcatcaagggctatcttggacgccaatgaatgtctgagaagttttcggacttgg gtaaacaacacgtccggtttaccaccacacgatcatgctatgcttttcacaggatatgatttgtacacgaagaaagacaa tacaaaacagttacacactgcaggattggcttatatacgtacaatgtgtaagcatggcggagatagtgtgtccgtcgttg aggatcacggtggattccaaaatgtaccaactgctgcccatgaaattggacacagtcttggtgccagacatgacggggag gataacctgtgtaactctgacgatcattatatcatgcattcctccgactccgggacacaagtacctacagagaaacgagt caaccaatggcatttctctcagtgctctcttgatgctttcagaagtttcattttcgagttgtcaagggagggctacacgt gcctaacagaaacctacgaggatatcacatcatccacgcccattggggttcctggacaagagtatgatcctgacgagcaa tgccgcatgatttggggtcctcagtcctacctttgcaggggtgaggaattcggcaatgccagcaacatatgctcttctat gtactgtagagaccctgacacagagaatgattgtgtactccatacagccgccaggggaacctcatgtggtaacaaaatg |
|
Protein
| Protein ID | pfu_aug1.0_14511.1_54062.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14511.1_54062.t1 MRSWHFQITCIVLSSFIVQTKFLTLQNFRFYHDPGIRETSIIVHCKTDRGTILISGNFQQNNKFYKLQHHLEEETKSVHY YMIMGDVIADSSTKEPLHDYVSLPTGSSNFHRKENDLLKDNSNIRHRRQVDIQQPYVIDVLVIIDYKIYTKWYETTTGVA LEREQETKTEIHSYFSYFMHEVGLRYESIDRADLRFKLKVTSFILADSPDVFLVTEVLKEPRSSRAILDANECLRSFRTW VNNTSGLPPHDHAMLFTGYDLYTKKDNTKQLHTAGLAYIRTMCKHGGDSVSVVEDHGGFQNVPTAAHEIGHSLGARHDGE DNLCNSDDHYIMHSSDSGTQVPTEKRVNQWHFSQCSLDAFRSFIFELSREGYTCLTETYEDITSSTPIGVPGQEYDPDEQ CRMIWGPQSYLCRGEEFGNASNICSSMYCRDPDTENDCVLHTAARGTSCGNKM |
|