Gene
| Gene Model ID | pfu_aug1.0_14511.1_54063 |
|---|---|
| Locus | scaffold14511.1 : 23496 ... 28008 : + |
| To GenomeBrowser | scaffold14511.1:23496..28008 |
| Genes list of scaffold | scaffold14511.1 |
| Synonym | pfu_aug2.0_1653.1_11789 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14511.1_54063.t1 | 1 | 1 | Neur_chan_LBD | 15 | 209 | 4.40008e-42 | 143.6 | 1.4013e-45 | 6.39973e-42 | 143.1 |
| pfu_aug1.0_14511.1_54063.t1 | 2 | 1 | Neur_chan_memb | 220 | 336 | 1.8e-15 | 57.5 | 3.6e-19 | 1.8e-15 | 57.5 |
| pfu_aug1.0_14511.1_54063.t1 | 2 | 2 | Neur_chan_memb | 380 | 394 | 1.8e-15 | 57.5 | 0.55 | 2700.0 | -2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14511.1_54063.t1 | gi|189532001|ref|XP_001921314.1| | PREDICTED: neuronal acetylcholine receptor subunit alpha-3 [Danio rerio] | 3.0e-39 |
Transcript
| Transcript ID | pfu_aug1.0_14511.1_54063.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14511.1_54063.t1 atgttggtcagtttgggtgtatgtatgacacgtaactcagagtacgatctacacaatgttctctttgccaattattcgtc agaaattcgtcccgtggacgatcaaaatgataagctgacaatcaatgtttctgctttcctgtctgccatcgttgaactgg acgaaccttcgggtcagctgaccacaaacatgggctttatccttacgtggacggacatcggtctaacgtgggatccagtg aacttcgagggacggactcgcacctttgtgggttacaacaagatttggacccctacagtgtttctcgtcaacccaagtcg agatttggaacgcctaggagaactagataggaaagtggccattgactccaatggcaccgtaacgtggtctgcgggtggga tagtatattcaatttgtaatgttgacgtcacattctttccttatgatgaacagatttgcgtcatgaagttcaattcgttt gaatacggtccgttaattgagtacgaaatactttcacctactctggatttaacctttttcggcgaaaacggtgtgtggtc tttagaaaagacagacgtgactatcgacactaccagcacgtttactctacagtgtactttgtatttgaccaggagatcaa cattctctcaactgaatataatggtgcccataatgctcctggtgttcctgaacattgcggtgtttctacttccgccggaa agcggagagcggattggatttgccgtcaccatcttactatcaatctctgtatatatgaccatagtgacagaccgtcttcc caacacatcgaagcctgtttcgatgttgaattacattctagttatatttttggcccaatcagctgtcatatgcatcaaaa ccgtcgtcggactgcgtctttatgccaaaggcgataagaagctaacctcgcccttgctgttgtgcttcgtaaaagcaatg aaatgtaaatgtagaaataaacggaaagttcaaattgatagtgatcacagttccgaggaagtcaatggagatccacagtt ccggctgaaggaagcgaaattcaacgaggaggaacccttaacatggaaggcattggcagaatcgtttgatacgttttctc tttgtttcaaccttgtaataactatcgtggtcgccctgattttcatggcggtggttgttattgtaaaacccgaacattaa |
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Protein
| Protein ID | pfu_aug1.0_14511.1_54063.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14511.1_54063.t1 MLVSLGVCMTRNSEYDLHNVLFANYSSEIRPVDDQNDKLTINVSAFLSAIVELDEPSGQLTTNMGFILTWTDIGLTWDPV NFEGRTRTFVGYNKIWTPTVFLVNPSRDLERLGELDRKVAIDSNGTVTWSAGGIVYSICNVDVTFFPYDEQICVMKFNSF EYGPLIEYEILSPTLDLTFFGENGVWSLEKTDVTIDTTSTFTLQCTLYLTRRSTFSQLNIMVPIMLLVFLNIAVFLLPPE SGERIGFAVTILLSISVYMTIVTDRLPNTSKPVSMLNYILVIFLAQSAVICIKTVVGLRLYAKGDKKLTSPLLLCFVKAM KCKCRNKRKVQIDSDHSSEEVNGDPQFRLKEAKFNEEEPLTWKALAESFDTFSLCFNLVITIVVALIFMAVVVIVKPEH |
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