Gene
| Gene Model ID | pfu_aug1.0_14511.1_54067 |
|---|---|
| Locus | scaffold14511.1 : 54196 ... 60227 : + |
| To GenomeBrowser | scaffold14511.1:54196..60227 |
| Genes list of scaffold | scaffold14511.1 |
| Synonym | pfu_aug2.0_1653.1_11788 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14511.1_54067.t1 | 5 | 1 | SH3_2 | 12 | 64 | 1.4013e-45 | 152.0 | 3.2e-14 | 9.4e-11 | 41.0 |
| pfu_aug1.0_14511.1_54067.t1 | 5 | 1 | SH3_1 | 14 | 59 | 0.0 | 178.4 | 3.0e-14 | 9.0e-11 | 40.9 |
| pfu_aug1.0_14511.1_54067.t1 | 5 | 1 | SH3_9 | 15 | 63 | 0.0 | 177.4 | 2.0e-15 | 6.0e-12 | 44.9 |
| pfu_aug1.0_14511.1_54067.t1 | 5 | 2 | SH3_1 | 79 | 122 | 0.0 | 178.4 | 7.3e-12 | 2.2e-08 | 33.3 |
| pfu_aug1.0_14511.1_54067.t1 | 5 | 2 | SH3_9 | 79 | 122 | 0.0 | 177.4 | 3.9e-09 | 1.2e-05 | 24.8 |
| pfu_aug1.0_14511.1_54067.t1 | 5 | 2 | SH3_2 | 79 | 128 | 1.4013e-45 | 152.0 | 2.4e-06 | 0.007 | 15.8 |
| pfu_aug1.0_14511.1_54067.t1 | 5 | 3 | SH3_2 | 150 | 200 | 1.4013e-45 | 152.0 | 5.9e-11 | 1.7e-07 | 30.5 |
| pfu_aug1.0_14511.1_54067.t1 | 5 | 3 | SH3_1 | 152 | 194 | 0.0 | 178.4 | 3.8e-11 | 1.1e-07 | 31.0 |
| pfu_aug1.0_14511.1_54067.t1 | 5 | 3 | SH3_9 | 152 | 200 | 0.0 | 177.4 | 3.0e-11 | 8.9e-08 | 31.6 |
| pfu_aug1.0_14511.1_54067.t1 | 5 | 4 | SH3_2 | 331 | 383 | 1.4013e-45 | 152.0 | 1.5e-11 | 4.6e-08 | 32.4 |
| pfu_aug1.0_14511.1_54067.t1 | 5 | 4 | SH3_1 | 333 | 378 | 0.0 | 178.4 | 1.4e-13 | 4.3e-10 | 38.8 |
| pfu_aug1.0_14511.1_54067.t1 | 5 | 4 | SH3_9 | 334 | 381 | 0.0 | 177.4 | 1.4e-14 | 4.1e-11 | 42.2 |
| pfu_aug1.0_14511.1_54067.t1 | 5 | 5 | SH3_2 | 436 | 487 | 1.4013e-45 | 152.0 | 7.5e-10 | 2.2e-06 | 27.0 |
| pfu_aug1.0_14511.1_54067.t1 | 5 | 5 | SH3_1 | 439 | 482 | 0.0 | 178.4 | 5.3e-11 | 1.6e-07 | 30.6 |
| pfu_aug1.0_14511.1_54067.t1 | 5 | 5 | SH3_9 | 447 | 487 | 0.0 | 177.4 | 3.8e-10 | 1.1e-06 | 28.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14511.1_54067.t1 | gi|328792726|ref|XP_001120271.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_14511.1_54067.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14511.1_54067.t1 atgaagccagaggttaaagagtatgtgaatcagtatgtgagagccgtgtatgactttgatacaaatcaccctaaggagat caatctacaaaaaggggacataattagagtgacgtcagcagtggacaacaattggctgtgtggtcagttgaggggtcaag agggaaactttccatccagcttcgtagaaaaacttaccctacctgcagtacaggaaaatcaaaagatatatggtgctata gaaaactttcctgctctgcaaccgggagatttagaattcagaaaaggtgcaataattataggtttacaatctgtggatga aaactggtggtcaggacagattggatcaaaagaaggcattttcccattaactcatgtgatcgaattagaaataccggcaa gtcttcgtgatcgtagtaagagctgccattctgctgaaccgctctttgctcaagccctttgtgattcagtagctcaacta gatgaggaacttagcttcagtacaggggacataatcacagtgacagaagtgatcgattccgactggtattatggggaact cggtagtaagaagggtatgttcctctcgtcttgtgtgcaattactacaagatgacaattctgccccaagttcccaacagg gtagcttcaagaaggaatctagtgttagtcagaacaaaacttggaatgaaaagtcaaattcacagtatttacaaaaatct tactcttttgatcaatcgtactatggaagtttaagttccgatcacaaggtcctgcctgatcctgtttcacatgtagagga ttccgtattcaacaaaccatactcagatagtgctggtcactcgttagattctccacagaacagtgaatcatatgatagcg gcattagtgtaaataccaatcatatcgcagggtactccgatcagtcgtccgcggacaatgcagcgtacactagcgagaac accaagagtgtggaatctagtgttaatccgtatggtgtcgctcagtttccgtttgctggacaatcggtcgatgagcttac atttgaggccaatgagattatttatttgattcaacatattgatgaacaatggacagagggtgaaattgatggaaaaatag ggatttttcccacatcttttgtgtcaattattgttgattgtccatatgcttattctgaacagggggaaaaagaggaagac aattcagcttctagaaaacaggaagaagaaggcagatctgaaaagagtcaagttgacttgaattcgcaaactgtcccgcc ttgtgcttcaggaaaagaggaatatgcattggttttgcatgaatttcttggggaagtagagggagatttacatgtagagc agggtgatactgtgaccgttatagagagagttgatgaaaactggattaaagcaaggaatgaggctggggaaattggactc tgcccaaaacagtttgtagagtttcttagtgatagtccctccagtattaaatctttacctgaaaattctgttgaaggt |
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Protein
| Protein ID | pfu_aug1.0_14511.1_54067.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14511.1_54067.t1 MKPEVKEYVNQYVRAVYDFDTNHPKEINLQKGDIIRVTSAVDNNWLCGQLRGQEGNFPSSFVEKLTLPAVQENQKIYGAI ENFPALQPGDLEFRKGAIIIGLQSVDENWWSGQIGSKEGIFPLTHVIELEIPASLRDRSKSCHSAEPLFAQALCDSVAQL DEELSFSTGDIITVTEVIDSDWYYGELGSKKGMFLSSCVQLLQDDNSAPSSQQGSFKKESSVSQNKTWNEKSNSQYLQKS YSFDQSYYGSLSSDHKVLPDPVSHVEDSVFNKPYSDSAGHSLDSPQNSESYDSGISVNTNHIAGYSDQSSADNAAYTSEN TKSVESSVNPYGVAQFPFAGQSVDELTFEANEIIYLIQHIDEQWTEGEIDGKIGIFPTSFVSIIVDCPYAYSEQGEKEED NSASRKQEEEGRSEKSQVDLNSQTVPPCASGKEEYALVLHEFLGEVEGDLHVEQGDTVTVIERVDENWIKARNEAGEIGL CPKQFVEFLSDSPSSIKSLPENSVEG |
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