Gene
Gene Model ID | pfu_aug1.0_14515.1_61368 |
---|---|
Locus | scaffold14515.1 : 5536 ... 17706 : + |
To GenomeBrowser | scaffold14515.1:5536..17706 |
Genes list of scaffold | scaffold14515.1 |
Synonym | pfu_aug2.0_89.1_30174 |
Manual annotation
Study field | signal molecules |
---|---|
Gene name | neuralized |
Description | Blast hits to various organisms neuralized. Best hits to Drosophila melanogaster neuralized. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_14515.1_61368.t1 | 1 | 1 | Neuralized | 49 | 118 | 2.5e-17 | 62.5 | 1.7e-20 | 4.2e-17 | 61.7 |
pfu_aug1.0_14515.1_61368.t1 | 1 | 1 | zf-C3HC4_3 | 254 | 303 | 5.6e-14 | 51.5 | 4.3e-17 | 1.1e-13 | 50.6 |
pfu_aug1.0_14515.1_61368.t1 | 1 | 1 | zf-C3HC4_2 | 257 | 296 | 2.3e-07 | 30.7 | 2.0e-10 | 4.8e-07 | 29.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_14515.1_61368.t1 | gi|321475148|gb|EFX86111.1| | hypothetical protein DAPPUDRAFT_44682, partial [Daphnia pulex] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_14515.1_61368.t1 |
---|---|
Definition | - |
>pfu_aug1.0_14515.1_61368.t1 atgtctcctctcaacaacacgcactccatgacggatctgacgcaagctatgacgtcactccagttccagagaggttcgca tgcggaagtagagcccaacgcccccttaattcctatccgacaccatgccaaccttaatttccgaccaatgccgtggcacc agcttacggggaagaacataagagtgatagactctgagagaacgatctctgtacggtcaagtgacgagtactgtaatgca tacgtcttctcctcacgacctttaaaatgtggtgaaaaaattgtaattcaaattttaggagttgatagatcatatgttgg aggtctggcatttggtttcactgcatttgaccctgtacatgtgaatagtgaagaactgcccgacgattcagatctactct tagataggaaggaatactgggttgtgaacaaagacgtctgccgggctcctgaaattggtgatgaactttgctttcatctc tctctaaatggtgtgacaactcatgtccctccagttcccccacggccaaggtccacaccttatacaatgactgtggcctt acctccacaggcgtctccctccacgactgcgcaggctgcagtggaagtctctcctcgacgagagccgcctggtatgtccc gcagtgtcagcgtcccgtctgcccgcatgtccgagccggtgtccccacctcctcctctacccaaacaactcagtatgaca tcggcagaaagtaccatcgatccagtagccgacaacgaggctaacgagtgtaccgtgtgttatgaaagagccgtaaatgc tgtactttacacgtgtggacacatgtgcatgtgctacgagtgtgcaatagtggttaaaaacaacaagggggctctgtgtc caatctgtagacaacatatcaaagatgtgatcaagatttatagaacatga |
Protein
Protein ID | pfu_aug1.0_14515.1_61368.t1 |
---|---|
Definition | - |
>pfu_aug1.0_14515.1_61368.t1 MSPLNNTHSMTDLTQAMTSLQFQRGSHAEVEPNAPLIPIRHHANLNFRPMPWHQLTGKNIRVIDSERTISVRSSDEYCNA YVFSSRPLKCGEKIVIQILGVDRSYVGGLAFGFTAFDPVHVNSEELPDDSDLLLDRKEYWVVNKDVCRAPEIGDELCFHL SLNGVTTHVPPVPPRPRSTPYTMTVALPPQASPSTTAQAAVEVSPRREPPGMSRSVSVPSARMSEPVSPPPPLPKQLSMT SAESTIDPVADNEANECTVCYERAVNAVLYTCGHMCMCYECAIVVKNNKGALCPICRQHIKDVIKIYRT |