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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_14515.1_61368
Locus scaffold14515.1 : 5536 ... 17706 : +
To GenomeBrowser scaffold14515.1:5536..17706
Genes list of scaffold scaffold14515.1
Synonym pfu_aug2.0_89.1_30174

Manual annotation
Study fieldsignal molecules
Gene nameneuralized
DescriptionBlast hits to various organisms neuralized. Best hits to Drosophila melanogaster neuralized.
mRNA evidence

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_14515.1_61368.t1 1 1 Neuralized 49 118 2.5e-17 62.5 1.7e-20 4.2e-17 61.7
pfu_aug1.0_14515.1_61368.t1 1 1 zf-C3HC4_3 254 303 5.6e-14 51.5 4.3e-17 1.1e-13 50.6
pfu_aug1.0_14515.1_61368.t1 1 1 zf-C3HC4_2 257 296 2.3e-07 30.7 2.0e-10 4.8e-07 29.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_14515.1_61368.t1 gi|321475148|gb|EFX86111.1| hypothetical protein DAPPUDRAFT_44682, partial [Daphnia pulex] 0.0

Transcript
Transcript IDpfu_aug1.0_14515.1_61368.t1
Definition-
>pfu_aug1.0_14515.1_61368.t1
atgtctcctctcaacaacacgcactccatgacggatctgacgcaagctatgacgtcactccagttccagagaggttcgca
tgcggaagtagagcccaacgcccccttaattcctatccgacaccatgccaaccttaatttccgaccaatgccgtggcacc
agcttacggggaagaacataagagtgatagactctgagagaacgatctctgtacggtcaagtgacgagtactgtaatgca
tacgtcttctcctcacgacctttaaaatgtggtgaaaaaattgtaattcaaattttaggagttgatagatcatatgttgg
aggtctggcatttggtttcactgcatttgaccctgtacatgtgaatagtgaagaactgcccgacgattcagatctactct
tagataggaaggaatactgggttgtgaacaaagacgtctgccgggctcctgaaattggtgatgaactttgctttcatctc
tctctaaatggtgtgacaactcatgtccctccagttcccccacggccaaggtccacaccttatacaatgactgtggcctt
acctccacaggcgtctccctccacgactgcgcaggctgcagtggaagtctctcctcgacgagagccgcctggtatgtccc
gcagtgtcagcgtcccgtctgcccgcatgtccgagccggtgtccccacctcctcctctacccaaacaactcagtatgaca
tcggcagaaagtaccatcgatccagtagccgacaacgaggctaacgagtgtaccgtgtgttatgaaagagccgtaaatgc
tgtactttacacgtgtggacacatgtgcatgtgctacgagtgtgcaatagtggttaaaaacaacaagggggctctgtgtc
caatctgtagacaacatatcaaagatgtgatcaagatttatagaacatga

Protein
Protein IDpfu_aug1.0_14515.1_61368.t1
Definition-
>pfu_aug1.0_14515.1_61368.t1
MSPLNNTHSMTDLTQAMTSLQFQRGSHAEVEPNAPLIPIRHHANLNFRPMPWHQLTGKNIRVIDSERTISVRSSDEYCNA
YVFSSRPLKCGEKIVIQILGVDRSYVGGLAFGFTAFDPVHVNSEELPDDSDLLLDRKEYWVVNKDVCRAPEIGDELCFHL
SLNGVTTHVPPVPPRPRSTPYTMTVALPPQASPSTTAQAAVEVSPRREPPGMSRSVSVPSARMSEPVSPPPPLPKQLSMT
SAESTIDPVADNEANECTVCYERAVNAVLYTCGHMCMCYECAIVVKNNKGALCPICRQHIKDVIKIYRT

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