Gene
Gene Model ID | pfu_aug1.0_1455.1_37019 |
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Locus | scaffold1455.1 : 16236 ... 27743 : + |
To GenomeBrowser | scaffold1455.1:16236..27743 |
Genes list of scaffold | scaffold1455.1 |
Synonym | pfu_aug2.0_689.1_31058 |
Manual annotation
Study field | signal molecules |
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Gene name | single-minded like |
Description | Best hit similar to Ixodes scapularis single-minded, putative NCBI BLAST. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1455.1_37019.t1 | 2 | 1 | PAS_11 | 67 | 173 | 2.7e-14 | 53.0 | 3.4e-17 | 1.2e-13 | 50.9 |
pfu_aug1.0_1455.1_37019.t1 | 1 | 1 | PAS_3 | 80 | 166 | 3.7e-18 | 65.4 | 2.8e-21 | 1.0e-17 | 63.9 |
pfu_aug1.0_1455.1_37019.t1 | 2 | 2 | PAS_11 | 250 | 298 | 2.7e-14 | 53.0 | 0.33 | 1200.0 | -0.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1455.1_37019.t1 | gi|301605109|ref|XP_002932187.1| | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_1455.1_37019.t1 |
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Definition | - |
>pfu_aug1.0_1455.1_37019.t1 atgaaatgcgttttggcaaaaaggaacgcgggtctgaccactgccggatataaggtcatacactgcagtggttaccttaa aatcaaacaatttcccatggagatgtcgccatacgaggggtgttaccagaacgtggggctggtcgccgtgggacactccc ttccccctagtgccatcactgaaatgaaactgttcaccaatatgttcatgttcagagccagtctagatctcaaactcatt tacttggatccaggagtgtcgcagttgattggctacgaccctcagcatcttatagagaggacactgtatcagtatattca tgcctgtgatattttacatatgagactttctcatcacacattgctcctgaaaggacaagtgaccacaaagtattaccgat ttttggccaaagacggcggttggtactggatacagagttatgccaccattgtccacaacagtcgctcttcacggccgcat tgtatcgtcagcgtcaactatgtgctcggagaggtggaatcaaggcaccttcaaatccagctagaacagactgttacgaa agaagcttcgccattctcaaatatgacgggtagatctcctagtggcaaagttagaactgcaaaatcaaaacaaagacgtt ctccgtatcctcatatagcggaaaatcccgagtactccggtgactttacggatagaattcacatggatttagtcccagat tcaaatgctcaagactatcaaaacgtttttcagaattcaatgcatccattagacggtaatgagaaatatggccatatata tggacagtaccatactaatggtgttattagtgatatttatcaatatcaggcgcagcaaagatttatagacgagaaactcc aatgtaagatggaggataagggcatttattcaagaaatatgaattattataacggattcataggttctcaaaacgatatg atgagtacaaagttgactcacatggacccggttgaccctcggtcagatatgtctccccaatacgattacagatcctcgcg ccattgctccagaagcagcanagtagtaattcaaggaaggaatggtagatatactagtagttag |
Protein
Protein ID | pfu_aug1.0_1455.1_37019.t1 |
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Definition | - |
>pfu_aug1.0_1455.1_37019.t1 MKCVLAKRNAGLTTAGYKVIHCSGYLKIKQFPMEMSPYEGCYQNVGLVAVGHSLPPSAITEMKLFTNMFMFRASLDLKLI YLDPGVSQLIGYDPQHLIERTLYQYIHACDILHMRLSHHTLLLKGQVTTKYYRFLAKDGGWYWIQSYATIVHNSRSSRPH CIVSVNYVLGEVESRHLQIQLEQTVTKEASPFSNMTGRSPSGKVRTAKSKQRRSPYPHIAENPEYSGDFTDRIHMDLVPD SNAQDYQNVFQNSMHPLDGNEKYGHIYGQYHTNGVISDIYQYQAQQRFIDEKLQCKMEDKGIYSRNMNYYNGFIGSQNDM MSTKLTHMDPVDPRSDMSPQYDYRSSRHCSRSSXVVIQGRNGRYTSS |