Gene
| Gene Model ID | pfu_aug1.0_1459.1_22599 |
|---|---|
| Locus | scaffold1459.1 : 1 ... 33632 : + |
| To GenomeBrowser | scaffold1459.1:1..33632 |
| Genes list of scaffold | scaffold1459.1 |
| Synonym | pfu_aug2.0_21.1_03442 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1459.1_22599.t1 | 1 | 1 | zf-CCCH | 165 | 188 | 4.3e-06 | 26.2 | 4.3e-09 | 9.1e-06 | 25.2 |
| pfu_aug1.0_1459.1_22599.t1 | 1 | 1 | AAA_12 | 326 | 407 | 5.0e-06 | 26.0 | 3.3e-09 | 6.9e-06 | 25.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1459.1_22599.t1 | gi|170039626|ref|XP_001847630.1| | helicase with zinc finger [Culex quinquefasciatus] | 4.0e-37 |
Transcript
| Transcript ID | pfu_aug1.0_1459.1_22599.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1459.1_22599.t1 aacaactgttttgtaattccacaggctaaatctaatattttaaaaactctttccttgcgcgtaccatcagagattggaac caactatgcttataacaggtcagctaacaagatcggaaataacaaagacaaaccgataggcaaacgagatgacaatgaat caaagggaaatgactctgatgatctcagcgttgatgttacgtctaacgatgatacgtctaccgacaaacttagatcagag gacagcagcacaaaacatagccaaggctcacatcatccatcatctatcacagtatcctcagacacagcttcaccctcatc taacacagaagaccaggatcattgttgtacattttgtgacattaagttttcatctgtggcggagttagagacacattgtc gtagtgacctacataaaaagaggatcacctcagacgatgatcagaattggcaatatcgtgtacctccaagaaatctaacg agtgaagagttcacactctgtagaagtttttctgataatggaaagtgtaattttggtgacaagtgtactcaggcacactc taaagaagaacttaatgaatggaaagaaaggttcaaattcaggaaacagcaaatcaaaattgctagagacaaacatctcc atggtaacacatacgcagaacaactcatggaaaaacttattaatgctgaaaattcaaaatctgtgatgacacagaatgta gagtatgctaagatacatgtaaattcagagttgaaagttaacatgacgaccaagaaatgtacgaatgcttggaccttcac aatcactagcaaggtttatgaagtgcttgtcgaagacaaagggaggaactttatatttcttagattgtcaggaaagtgtg tggaggaacttaacttatctagtgaccaggaattctatgctgagttgaatccagaggtatactcagactttgctaagcag cagggattccacaagaatctgttagatcgtctgtacgagttttaccctgataactgtccctgtaagataatgctgtgtga gaactacagatcccatgctgccatcattgactttacctctgatctattctacgacagtcagctggtctccggtagtaatc agcccttacatcccatgtactaccctctgacgttcttctctacacgaggggaggacatacaacatcaaaacaacactgga ttctataatatagcagagatgtacccatcctacatgcctttaccataccatcagggctactatccccccatgttgtatcg accctatgttccacactttgtcggaggaaggggaggtagggtccccacaagggtggtgtaccctcgtcagatgcccccta ctgtccccctagccacttctggaagggcaactcctgacaaggaaaggtcaagtccagaggtcaccagggccacagaatct ccccaatcacaagggaccaagaaggcacacgtctcacagaggaatcgtcagatggtgtatataccaagagtgcagactcc attccagaccatgtactataacccctaccatcagccatacccaggttattacttcttaccagaggatcctagattagccc ccacattacaccctcaaagatatccttactaccccgggacaggtatacacccagctcacatgctcccacaacattatgct ggtgctcctttcttacctcccactactgtgattcgtcctggccagccattacaagagggagcacccatcccaggagatgt agatgtcaaagatagggttcactctaactcctcttccccaagcccccagggacgggcttactccccggcagtgtcacctg ggtccacgatgggaggacaacacatccagcttctgcctaatgccagacatatacctgtccatctgtataacaggtccggc acacccagtagtggctccagatctagtactcctatgggagggagggattcaccagaacaagtggaagatatgagacgggt gttagaatcagaatatctgaaatctgtaagccctgcactggaaatgcaggaacggcgagcgtcagcacagagtcctctgg caagggtgatcactcaacgacaaggctatgtaagagaagaacatgtatcacaggcaggattgcaggcgtccatgtctagt agtgtacagtacaacgcctccatgatagtgtctgaggagtccatgtcaccagtgcacaatggagaaaggagtgatggagc atcatccactagaaggaaagacggcaggagaatgcccagcaagctggaaataccaacagggttcagccgtcagttcagtg aggatattgaaacaccaactgaaattacaaacctggtaagaatgatagatgaaaccattgacgaacaagcagagctggga atgagagaacaaatgaccctagagaaccagaactcctttgcctctcggcttagctctaaaagctctagtggtaagctgta cctcaacatccccaaacgttcatcaatggatacgtcaggttcagcctcttcctcctccccatcttccagccctacaggga gtgacgacaggaagcctacgtatgctggggtcttacgtcgtcgcttaccaacctcgtctgaggagatcgaccccagtatg ttagaaccacagacccctcacacaccggctggattcgtatctccaggagatgatatcgatacagaccctctaggaattct gagaaatcttaacatcaatgcttcagcagagaatcagagaacctataaatatttttcttag |
|
Protein
| Protein ID | pfu_aug1.0_1459.1_22599.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1459.1_22599.t1 NNCFVIPQAKSNILKTLSLRVPSEIGTNYAYNRSANKIGNNKDKPIGKRDDNESKGNDSDDLSVDVTSNDDTSTDKLRSE DSSTKHSQGSHHPSSITVSSDTASPSSNTEDQDHCCTFCDIKFSSVAELETHCRSDLHKKRITSDDDQNWQYRVPPRNLT SEEFTLCRSFSDNGKCNFGDKCTQAHSKEELNEWKERFKFRKQQIKIARDKHLHGNTYAEQLMEKLINAENSKSVMTQNV EYAKIHVNSELKVNMTTKKCTNAWTFTITSKVYEVLVEDKGRNFIFLRLSGKCVEELNLSSDQEFYAELNPEVYSDFAKQ QGFHKNLLDRLYEFYPDNCPCKIMLCENYRSHAAIIDFTSDLFYDSQLVSGSNQPLHPMYYPLTFFSTRGEDIQHQNNTG FYNIAEMYPSYMPLPYHQGYYPPMLYRPYVPHFVGGRGGRVPTRVVYPRQMPPTVPLATSGRATPDKERSSPEVTRATES PQSQGTKKAHVSQRNRQMVYIPRVQTPFQTMYYNPYHQPYPGYYFLPEDPRLAPTLHPQRYPYYPGTGIHPAHMLPQHYA GAPFLPPTTVIRPGQPLQEGAPIPGDVDVKDRVHSNSSSPSPQGRAYSPAVSPGSTMGGQHIQLLPNARHIPVHLYNRSG TPSSGSRSSTPMGGRDSPEQVEDMRRVLESEYLKSVSPALEMQERRASAQSPLARVITQRQGYVREEHVSQAGLQASMSS SVQYNASMIVSEESMSPVHNGERSDGASSTRRKDGRRMPSKLEIPTGFSRQFSEDIETPTEITNLVRMIDETIDEQAELG MREQMTLENQNSFASRLSSKSSSGKLYLNIPKRSSMDTSGSASSSSPSSSPTGSDDRKPTYAGVLRRRLPTSSEEIDPSM LEPQTPHTPAGFVSPGDDIDTDPLGILRNLNINASAENQRTYKYFS |
|