Gene
| Gene Model ID | pfu_aug1.0_1459.1_22600 |
|---|---|
| Locus | scaffold1459.1 : 34057 ... 36295 : - |
| To GenomeBrowser | scaffold1459.1:34057..36295 |
| Genes list of scaffold | scaffold1459.1 |
| Synonym | pfu_aug2.0_21.1_03444 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1459.1_22600.t1 | 1 | 1 | Neur_chan_LBD | 3 | 149 | 1.4e-25 | 89.7 | 4.3e-29 | 2.1e-25 | 89.1 |
| pfu_aug1.0_1459.1_22600.t1 | 2 | 1 | Neur_chan_memb | 158 | 241 | 2.1e-14 | 53.9 | 4.3e-18 | 2.1e-14 | 53.9 |
| pfu_aug1.0_1459.1_22600.t1 | 2 | 2 | Neur_chan_memb | 251 | 270 | 2.1e-14 | 53.9 | 0.12 | 600.0 | 0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1459.1_22600.t1 | gi|47225373|emb|CAG11856.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 6.0e-30 |
Transcript
| Transcript ID | pfu_aug1.0_1459.1_22600.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1459.1_22600.t1 atggcaatagacatcaggtgggtagatgctttcttaaagtggaatccaagacaatatggaaacgtcggaacgataatttt accagacgatcagatttggaaacctttcctggctctagcaaacccaaaaggggacggaatcctttttgcagatagcccat tcaaagtacgcgtattctacaacggcacaattgtttggttgaccgcgggaacgctgacagtggcgtgtaaacctgacgtc agaaattatccttttgacgtacatagctgtagtgtcaaaatattcccaatggacgaaatcatacgtgaaattcgtctaca ttccgatcttaaacttcatgtatttgacaacttcggacaatgggacatgattcatgagggagtgtacgatgacatgttgg atatattttctctaactgtatttcacttcaaaatcagacggcgaccgcagttttctgttcttggaatctgcttacctatt cttttcatcggaattatgaacgcatgcgtatttattatacccccggcttccggtgagaggatatcgtttgctatcacggt acttttggctcttgtagtgtttatgacgattgtccactcttccatgccaaagaactcggaccctgtacctattttgtcct atgtattgatggtcatgatgatagaaagtggactagtggtttttcttaccgtgatgagtctgcgattccatttgaatcaa caaatgtcagatgatgatttcatctttaagatcaagcccgctctctttgacagattttgtttctggatttctttaatagc gtttgttacaacagtatgtggctttatcttaggactttatgtacgcaaacaatccaatacataa |
|
Protein
| Protein ID | pfu_aug1.0_1459.1_22600.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1459.1_22600.t1 MAIDIRWVDAFLKWNPRQYGNVGTIILPDDQIWKPFLALANPKGDGILFADSPFKVRVFYNGTIVWLTAGTLTVACKPDV RNYPFDVHSCSVKIFPMDEIIREIRLHSDLKLHVFDNFGQWDMIHEGVYDDMLDIFSLTVFHFKIRRRPQFSVLGICLPI LFIGIMNACVFIIPPASGERISFAITVLLALVVFMTIVHSSMPKNSDPVPILSYVLMVMMIESGLVVFLTVMSLRFHLNQ QMSDDDFIFKIKPALFDRFCFWISLIAFVTTVCGFILGLYVRKQSNT |
|