Gene
| Gene Model ID | pfu_aug1.0_14613.1_46776 |
|---|---|
| Locus | scaffold14613.1 : 341 ... 13236 : - |
| To GenomeBrowser | scaffold14613.1:341..13236 |
| Genes list of scaffold | scaffold14613.1 |
| Synonym | pfu_aug2.0_364.1_14050 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14613.1_46776.t1 | 2 | 1 | Ldl_recept_a | 1 | 35 | 9.1e-18 | 63.8 | 3.8e-11 | 1.9e-07 | 30.8 |
| pfu_aug1.0_14613.1_46776.t1 | 2 | 1 | Methyltransf_FA | 101 | 187 | 9.6e-09 | 35.1 | 0.00013 | 0.64 | 10.0 |
| pfu_aug1.0_14613.1_46776.t1 | 2 | 2 | Ldl_recept_a | 203 | 239 | 9.1e-18 | 63.8 | 1.5e-13 | 7.3e-10 | 38.5 |
| pfu_aug1.0_14613.1_46776.t1 | 2 | 2 | Methyltransf_FA | 282 | 363 | 9.6e-09 | 35.1 | 1.2e-08 | 6.2e-05 | 22.9 |
Transcript
| Transcript ID | pfu_aug1.0_14613.1_46776.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14613.1_46776.t1 attgtgatgattccgagtttcgttgtacatatggcagatgttatcctggtacagtgaagtgtgacggtaaaatagattgc tcggataaaagtgatgaactggattgtcttgtgtcacacttatgccctttgacgcgtggaggtcgtgaaaaagttccccg cgaggggtttgacactatccatttgaagcctcgtagtgatataaacctttcgcaatatggactacatcctaatggtagct cgagtttcaagttttctgtgaagacatgtgaagaggcagtggtgaaaatgtggaacaggggaacaaggctatatgaaatt ggtcttggacggggaaaaaatagtagatcaaccctattcaaagcaggaagtcatcctccactccgtcactatggcgcaat tttggactgcgaaaagtttcttcccttctatgtaagttggtctggatcaagcgtacaagtgggacgaggacatgagctag gcacggatgttatactcgagcttaaagatacaataacatccatgattgatgaaatttcagtatcttcctattcaaaagac gtcttcttcaacatcgaagcagatggaatacaatgtattctagccttgcctgcatgtagtaccaacgaataccgttgtgg ctatggtagatgtatcgttggagcctttagatgtgatgatattccacactgcacagacggctctgatgaaaaggactgtc ctatcgaagtgccaaaaagaacaaaagacgccatatcaaatcatcagtataacataacaggaatgaattggataaacttc gaagtacaaagttgtggtgacgcttttgtcaaactattacaagaaggcaatgccatgtttggtgtcttgctaggaagagg aagaaattcctggagttccattttcaattacataacaaagcaggaaaagtataagtcgaacacaccagttcttgactgtg atagttacaagcagttttggttttcttggagtgatgggcacgtgaaggtcggaaagggacttatcaagggaaataatctt cttcttgagataccatacaactcgcctgttaatatagacgatgtacaactccaatcaaatggctatgataacgtattcaa aataagacaaggagtccccgagggcacatgtaccaagttcgatgaacttcggttgatcgtctgtctcttcaacgcattca aaattttctggtactaa |
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Protein
| Protein ID | pfu_aug1.0_14613.1_46776.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14613.1_46776.t1 CDDSEFRCTYGRCYPGTVKCDGKIDCSDKSDELDCLVSHLCPLTRGGREKVPREGFDTIHLKPRSDINLSQYGLHPNGSS SFKFSVKTCEEAVVKMWNRGTRLYEIGLGRGKNSRSTLFKAGSHPPLRHYGAILDCEKFLPFYVSWSGSSVQVGRGHELG TDVILELKDTITSMIDEISVSSYSKDVFFNIEADGIQCILALPACSTNEYRCGYGRCIVGAFRCDDIPHCTDGSDEKDCP IEVPKRTKDAISNHQYNITGMNWINFEVQSCGDAFVKLLQEGNAMFGVLLGRGRNSWSSIFNYITKQEKYKSNTPVLDCD SYKQFWFSWSDGHVKVGKGLIKGNNLLLEIPYNSPVNIDDVQLQSNGYDNVFKIRQGVPEGTCTKFDELRLIVCLFNAFK IFWY |
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