Gene
| Gene Model ID | pfu_aug1.0_1464.1_00723 |
|---|---|
| Locus | scaffold1464.1 : 21066 ... 27988 : + |
| To GenomeBrowser | scaffold1464.1:21066..27988 |
| Genes list of scaffold | scaffold1464.1 |
| Synonym | pfu_aug2.0_221.1_03816 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1464.1_00723.t1 | 7 | 1 | LRR_8 | 3 | 45 | 3.5e-30 | 103.5 | 9.2e-09 | 1.1e-05 | 25.0 |
| pfu_aug1.0_1464.1_00723.t1 | 9 | 1 | LRR_4 | 12 | 47 | 4.6e-23 | 80.3 | 2.0e-06 | 0.0024 | 17.4 |
| pfu_aug1.0_1464.1_00723.t1 | 11 | 1 | LRR_1 | 12 | 24 | 3.5e-16 | 56.7 | 0.017 | 21.0 | 5.6 |
| pfu_aug1.0_1464.1_00723.t1 | 10 | 1 | LRR_6 | 12 | 23 | 4.3e-09 | 35.5 | 0.17 | 210.0 | 2.5 |
| pfu_aug1.0_1464.1_00723.t1 | 8 | 1 | LRR_7 | 12 | 23 | 5.2e-06 | 25.8 | 0.12 | 150.0 | 3.3 |
| pfu_aug1.0_1464.1_00723.t1 | 3 | 1 | LRR_5 | 21 | 65 | 2.2e-09 | 37.0 | 0.71 | 880.0 | -0.5 |
| pfu_aug1.0_1464.1_00723.t1 | 10 | 2 | LRR_6 | 33 | 53 | 4.3e-09 | 35.5 | 0.0029 | 3.6 | 7.9 |
| pfu_aug1.0_1464.1_00723.t1 | 9 | 2 | LRR_4 | 35 | 68 | 4.6e-23 | 80.3 | 9.1e-06 | 0.011 | 15.3 |
| pfu_aug1.0_1464.1_00723.t1 | 11 | 2 | LRR_1 | 35 | 46 | 3.5e-16 | 56.7 | 0.1 | 120.0 | 3.2 |
| pfu_aug1.0_1464.1_00723.t1 | 8 | 2 | LRR_7 | 35 | 47 | 5.2e-06 | 25.8 | 0.13 | 160.0 | 3.1 |
| pfu_aug1.0_1464.1_00723.t1 | 7 | 2 | LRR_8 | 52 | 90 | 3.5e-30 | 103.5 | 1.5e-05 | 0.018 | 14.7 |
| pfu_aug1.0_1464.1_00723.t1 | 10 | 3 | LRR_6 | 55 | 68 | 4.3e-09 | 35.5 | 0.022 | 27.0 | 5.2 |
| pfu_aug1.0_1464.1_00723.t1 | 11 | 3 | LRR_1 | 57 | 79 | 3.5e-16 | 56.7 | 0.0036 | 4.4 | 7.7 |
| pfu_aug1.0_1464.1_00723.t1 | 7 | 3 | LRR_8 | 78 | 143 | 3.5e-30 | 103.5 | 1.0e-08 | 1.3e-05 | 24.8 |
| pfu_aug1.0_1464.1_00723.t1 | 9 | 3 | LRR_4 | 78 | 125 | 4.6e-23 | 80.3 | 0.00027 | 0.34 | 10.6 |
| pfu_aug1.0_1464.1_00723.t1 | 10 | 4 | LRR_6 | 78 | 90 | 4.3e-09 | 35.5 | 0.08 | 99.0 | 3.4 |
| pfu_aug1.0_1464.1_00723.t1 | 8 | 3 | LRR_7 | 78 | 94 | 5.2e-06 | 25.8 | 0.022 | 28.0 | 5.5 |
| pfu_aug1.0_1464.1_00723.t1 | 11 | 4 | LRR_1 | 79 | 96 | 3.5e-16 | 56.7 | 0.0017 | 2.1 | 8.7 |
| pfu_aug1.0_1464.1_00723.t1 | 10 | 5 | LRR_6 | 106 | 121 | 4.3e-09 | 35.5 | 0.016 | 19.0 | 5.6 |
| pfu_aug1.0_1464.1_00723.t1 | 8 | 4 | LRR_7 | 107 | 122 | 5.2e-06 | 25.8 | 0.33 | 400.0 | 2.0 |
| pfu_aug1.0_1464.1_00723.t1 | 11 | 5 | LRR_1 | 108 | 124 | 3.5e-16 | 56.7 | 0.15 | 180.0 | 2.8 |
| pfu_aug1.0_1464.1_00723.t1 | 3 | 2 | LRR_5 | 109 | 191 | 2.2e-09 | 37.0 | 3.4e-05 | 0.042 | 13.5 |
| pfu_aug1.0_1464.1_00723.t1 | 7 | 4 | LRR_8 | 131 | 191 | 3.5e-30 | 103.5 | 1.1e-10 | 1.4e-07 | 31.1 |
| pfu_aug1.0_1464.1_00723.t1 | 9 | 4 | LRR_4 | 131 | 163 | 4.6e-23 | 80.3 | 1.6e-05 | 0.02 | 14.5 |
| pfu_aug1.0_1464.1_00723.t1 | 10 | 6 | LRR_6 | 131 | 143 | 4.3e-09 | 35.5 | 0.016 | 20.0 | 5.6 |
| pfu_aug1.0_1464.1_00723.t1 | 8 | 5 | LRR_7 | 131 | 147 | 5.2e-06 | 25.8 | 0.029 | 36.0 | 5.1 |
| pfu_aug1.0_1464.1_00723.t1 | 11 | 6 | LRR_1 | 132 | 152 | 3.5e-16 | 56.7 | 0.0053 | 6.5 | 7.1 |
| pfu_aug1.0_1464.1_00723.t1 | 9 | 5 | LRR_4 | 180 | 220 | 4.6e-23 | 80.3 | 2.4e-05 | 0.03 | 13.9 |
| pfu_aug1.0_1464.1_00723.t1 | 10 | 7 | LRR_6 | 180 | 192 | 4.3e-09 | 35.5 | 0.86 | 1100.0 | 0.3 |
| pfu_aug1.0_1464.1_00723.t1 | 8 | 6 | LRR_7 | 180 | 192 | 5.2e-06 | 25.8 | 0.18 | 220.0 | 2.8 |
| pfu_aug1.0_1464.1_00723.t1 | 11 | 7 | LRR_1 | 181 | 200 | 3.5e-16 | 56.7 | 0.084 | 100.0 | 3.5 |
| pfu_aug1.0_1464.1_00723.t1 | 3 | 3 | LRR_5 | 198 | 304 | 2.2e-09 | 37.0 | 1.6e-07 | 0.0002 | 21.0 |
| pfu_aug1.0_1464.1_00723.t1 | 7 | 5 | LRR_8 | 203 | 244 | 3.5e-30 | 103.5 | 2.4e-05 | 0.03 | 14.0 |
| pfu_aug1.0_1464.1_00723.t1 | 10 | 8 | LRR_6 | 208 | 220 | 4.3e-09 | 35.5 | 0.00048 | 0.59 | 10.3 |
| pfu_aug1.0_1464.1_00723.t1 | 9 | 6 | LRR_4 | 209 | 245 | 4.6e-23 | 80.3 | 0.00014 | 0.17 | 11.5 |
| pfu_aug1.0_1464.1_00723.t1 | 11 | 8 | LRR_1 | 210 | 228 | 3.5e-16 | 56.7 | 0.001 | 1.2 | 9.4 |
| pfu_aug1.0_1464.1_00723.t1 | 8 | 7 | LRR_7 | 210 | 220 | 5.2e-06 | 25.8 | 0.034 | 42.0 | 5.0 |
| pfu_aug1.0_1464.1_00723.t1 | 7 | 6 | LRR_8 | 238 | 295 | 3.5e-30 | 103.5 | 2.0e-07 | 0.00025 | 20.7 |
| pfu_aug1.0_1464.1_00723.t1 | 9 | 7 | LRR_4 | 250 | 276 | 4.6e-23 | 80.3 | 0.0013 | 1.6 | 8.4 |
| pfu_aug1.0_1464.1_00723.t1 | 7 | 7 | LRR_8 | 260 | 304 | 3.5e-30 | 103.5 | 1.3e-07 | 0.00016 | 21.3 |
| pfu_aug1.0_1464.1_00723.t1 | 9 | 8 | LRR_4 | 260 | 301 | 4.6e-23 | 80.3 | 1.1e-07 | 0.00014 | 21.3 |
| pfu_aug1.0_1464.1_00723.t1 | 10 | 9 | LRR_6 | 260 | 274 | 4.3e-09 | 35.5 | 0.42 | 510.0 | 1.2 |
| pfu_aug1.0_1464.1_00723.t1 | 11 | 9 | LRR_1 | 262 | 280 | 3.5e-16 | 56.7 | 0.085 | 110.0 | 3.5 |
| pfu_aug1.0_1464.1_00723.t1 | 9 | 9 | LRR_4 | 285 | 323 | 4.6e-23 | 80.3 | 3.7e-05 | 0.046 | 13.3 |
| pfu_aug1.0_1464.1_00723.t1 | 11 | 10 | LRR_1 | 285 | 306 | 3.5e-16 | 56.7 | 0.0013 | 1.6 | 9.0 |
| pfu_aug1.0_1464.1_00723.t1 | 8 | 8 | LRR_7 | 285 | 299 | 5.2e-06 | 25.8 | 0.097 | 120.0 | 3.6 |
| pfu_aug1.0_1464.1_00723.t1 | 10 | 10 | LRR_6 | 286 | 299 | 4.3e-09 | 35.5 | 0.76 | 940.0 | 0.4 |
| pfu_aug1.0_1464.1_00723.t1 | 11 | 11 | LRR_1 | 313 | 321 | 3.5e-16 | 56.7 | 0.44 | 540.0 | 1.3 |
| pfu_aug1.0_1464.1_00723.t1 | 1 | 1 | TIR | 395 | 528 | 2.1e-24 | 85.5 | 3.0e-27 | 3.7e-24 | 84.7 |
| pfu_aug1.0_1464.1_00723.t1 | 1 | 1 | TIR_2 | 395 | 495 | 2.7e-13 | 49.9 | 4.9e-16 | 6.1e-13 | 48.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1464.1_00723.t1 | gi|192455666|ref|NP_001122147.1| | toll-like receptor 22 precursor [Danio rerio] | 5.0e-39 |
Transcript
| Transcript ID | pfu_aug1.0_1464.1_00723.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1464.1_00723.t1 atggggatattcgagcacctggtaggttataaagtccaaaagctaactttgagcggcaataatatccagacgtggtcgga tgcagcatcaataggattaagaaacttatcagaacttatcctctcgaataacaaagtgatgacatgtgatcacctctcta ccttgacgtcattacagtacattgacttaagctccaacatgattcctcgatgtgatatgggaatgcttccgccatctcta gttatccttcgactttcacacaacaaacttcgaaagtttccaaaattgtgttccgatgatggcaacaccgtcctattgcc tcatcttagcgaacttaagatagattataacaacatcaatacaatagaaaatatccttcacccatgttttccgtccctta cacacttgacattagaaggtaatgatattaaacgtttcccggaaaagacattctcttacatgcccaggcttctctattta cacttgaaccaaatgagaagaggagtaaaggtaatagaacgaaatgcttttgatattccgtccttgaaaaaactctactt cagacgaaataagttcagttttaggaaaaagacattgatctattctatttcttttggagcgtgcaaaaatcttgaaatct tggatctatcttacaacagaatgcctacgtcaacagaagttttacataaattactttttggactaaatacactgacacaa ttgcgtctggagagcgtagaatggaaagctatacccgaagaactatttgaaatgtttccgaacatggagaaagtctggct ttctcataacggaattcataaaattgacagaagcctttttaccgagaaaatgaaattaaaagtgatttatctaaaccaca atggcttctctagtttgagctctggatcttttccaaaattcttctggaagtctgccgaaagaattgatttatctggaaac ccgtacgcttgcaactgtgatctcatgtggttccggaataagttgaacagctctccttcactttttcatgaatatcccaa aaagtacatttgttcttctccgaaagaatttagaggcatcgaaataacaagatggcacatccgctattggatttacctcc tacgatttagacgtactggtatcgaaaggaaacatgacgataataatggcttcgcgtttgacgtgtttgtatcatacgcc gaggaagatggcgacttcgttcacaatatccttctcaacaaattggaagctgaacacaaatacagattgtgtattcacgc tagggattttgaagcaggaagaatgattgtagataacattgcagaaaacatgacatctagtaggcaagtgttgttagttt tatctgagagcttttgcaagagtaaatggtgcaagttggagcaactaatcgccttggatcgatggttgaacaatgagtca gagccaatcgtcatgataatgcttgagggaatacacagcaaaaatatgaataaagatatgaggatccttttaagtactac cacttatgtgcagtgggccttgaatgataccggtaaagaagtattttggaatcaacttctcgcctctcttaagcgataa |
|
Protein
| Protein ID | pfu_aug1.0_1464.1_00723.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1464.1_00723.t1 MGIFEHLVGYKVQKLTLSGNNIQTWSDAASIGLRNLSELILSNNKVMTCDHLSTLTSLQYIDLSSNMIPRCDMGMLPPSL VILRLSHNKLRKFPKLCSDDGNTVLLPHLSELKIDYNNINTIENILHPCFPSLTHLTLEGNDIKRFPEKTFSYMPRLLYL HLNQMRRGVKVIERNAFDIPSLKKLYFRRNKFSFRKKTLIYSISFGACKNLEILDLSYNRMPTSTEVLHKLLFGLNTLTQ LRLESVEWKAIPEELFEMFPNMEKVWLSHNGIHKIDRSLFTEKMKLKVIYLNHNGFSSLSSGSFPKFFWKSAERIDLSGN PYACNCDLMWFRNKLNSSPSLFHEYPKKYICSSPKEFRGIEITRWHIRYWIYLLRFRRTGIERKHDDNNGFAFDVFVSYA EEDGDFVHNILLNKLEAEHKYRLCIHARDFEAGRMIVDNIAENMTSSRQVLLVLSESFCKSKWCKLEQLIALDRWLNNES EPIVMIMLEGIHSKNMNKDMRILLSTTTYVQWALNDTGKEVFWNQLLASLKR |
|