Gene
| Gene Model ID | pfu_aug1.0_1464.1_00726 |
|---|---|
| Locus | scaffold1464.1 : 42756 ... 52731 : + |
| To GenomeBrowser | scaffold1464.1:42756..52731 |
| Genes list of scaffold | scaffold1464.1 |
| Synonym | pfu_aug2.0_221.1_03814 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1464.1_00726.t1 | 4 | 1 | LRR_4 | 144 | 167 | 3.4e-13 | 48.8 | 0.00013 | 0.22 | 11.2 |
| pfu_aug1.0_1464.1_00726.t1 | 4 | 1 | LRR_8 | 151 | 198 | 4.0e-17 | 61.7 | 1.0e-08 | 1.6e-05 | 24.5 |
| pfu_aug1.0_1464.1_00726.t1 | 4 | 2 | LRR_4 | 151 | 191 | 3.4e-13 | 48.8 | 2.3e-07 | 0.00038 | 19.9 |
| pfu_aug1.0_1464.1_00726.t1 | 5 | 1 | LRR_7 | 151 | 166 | 9.5e-06 | 25.0 | 0.018 | 30.0 | 5.4 |
| pfu_aug1.0_1464.1_00726.t1 | 5 | 1 | LRR_1 | 152 | 167 | 3.1e-08 | 32.5 | 0.014 | 23.0 | 5.5 |
| pfu_aug1.0_1464.1_00726.t1 | 5 | 2 | LRR_7 | 175 | 191 | 9.5e-06 | 25.0 | 0.0038 | 6.2 | 7.4 |
| pfu_aug1.0_1464.1_00726.t1 | 5 | 2 | LRR_1 | 176 | 198 | 3.1e-08 | 32.5 | 0.0065 | 11.0 | 6.5 |
| pfu_aug1.0_1464.1_00726.t1 | 2 | 1 | LRR_5 | 177 | 230 | 9.6e-06 | 25.3 | 0.00085 | 1.4 | 8.6 |
| pfu_aug1.0_1464.1_00726.t1 | 4 | 2 | LRR_8 | 248 | 266 | 4.0e-17 | 61.7 | 2.9e-05 | 0.048 | 13.4 |
| pfu_aug1.0_1464.1_00726.t1 | 4 | 3 | LRR_4 | 248 | 269 | 3.4e-13 | 48.8 | 2.7e-06 | 0.0045 | 16.5 |
| pfu_aug1.0_1464.1_00726.t1 | 5 | 3 | LRR_7 | 254 | 266 | 9.5e-06 | 25.0 | 0.0066 | 11.0 | 6.7 |
| pfu_aug1.0_1464.1_00726.t1 | 5 | 3 | LRR_1 | 255 | 268 | 3.1e-08 | 32.5 | 0.00042 | 0.69 | 10.1 |
| pfu_aug1.0_1464.1_00726.t1 | 4 | 3 | LRR_8 | 283 | 341 | 4.0e-17 | 61.7 | 2.8e-09 | 4.6e-06 | 26.2 |
| pfu_aug1.0_1464.1_00726.t1 | 2 | 2 | LRR_5 | 296 | 352 | 9.6e-06 | 25.3 | 2.4e-05 | 0.04 | 13.6 |
| pfu_aug1.0_1464.1_00726.t1 | 4 | 4 | LRR_4 | 305 | 367 | 3.4e-13 | 48.8 | 4.5e-05 | 0.073 | 12.7 |
| pfu_aug1.0_1464.1_00726.t1 | 5 | 4 | LRR_7 | 305 | 320 | 9.5e-06 | 25.0 | 0.28 | 460.0 | 1.8 |
| pfu_aug1.0_1464.1_00726.t1 | 5 | 4 | LRR_1 | 307 | 327 | 3.1e-08 | 32.5 | 0.0068 | 11.0 | 6.4 |
| pfu_aug1.0_1464.1_00726.t1 | 4 | 4 | LRR_8 | 331 | 365 | 4.0e-17 | 61.7 | 4.2e-05 | 0.069 | 12.9 |
| pfu_aug1.0_1464.1_00726.t1 | 5 | 5 | LRR_1 | 356 | 369 | 3.1e-08 | 32.5 | 0.0026 | 4.3 | 7.7 |
| pfu_aug1.0_1464.1_00726.t1 | 5 | 5 | LRR_7 | 356 | 367 | 9.5e-06 | 25.0 | 0.027 | 44.0 | 4.9 |
| pfu_aug1.0_1464.1_00726.t1 | 1 | 1 | TIR | 479 | 612 | 6.6e-27 | 93.6 | 6.5e-30 | 1.1e-26 | 93.0 |
| pfu_aug1.0_1464.1_00726.t1 | 1 | 1 | TIR_2 | 480 | 579 | 1.1e-12 | 47.9 | 1.2e-15 | 2.0e-12 | 47.1 |
Transcript
| Transcript ID | pfu_aug1.0_1464.1_00726.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1464.1_00726.t1 atgcatattatcatccgaggagtccgactgacattcagagaggacagatttgtttttatacacatacgaaaaagaattct tgccaaatctgcaaaactcaagaaatttgacgacttgaaatgtttcaacggcacctctagttatcttgatgatgttttga atatcgataacccacattttgaccataacaaaaatcaaatttatcctccagagttaacattgaacaaatcaaacacaaat gatatagctaaaccattttgggatcttgatatgaaaatcaataacggagaaatgaagacaaaaatatacgacaaaacaga agactttggctttaacatagttaattttccttgtttgatgacgatgttcccagattgccatcgtacgaaaattccgtctc tcagctcatcggctgcctcaattctgcagaaacttacagaaccgttgctaccaaaattaaaagtcttgaatttaaggtac aacttgattcatagcttgtatcaaatgaaaagccagtgtcttccgtcgctgaaacgtttggtattggcacagaatgaaat tcatcattttccaaaatatgctttctccagcttgacaattgaagatctagacataggaagcatgaaaggaggtgtagaca ctgtttcccataatgcctttgacatccaaactcttaagaaatttagatttgacttaaataattttaaatttcaaatcaac tggccacattatgccatcagaggatcccttcgaaactgtacaaagttggaatatctcgatttatcgtacaatcacttacc caaatggactgatggcgttcgtgccctcttaggtgaattaagagttttacataccttacgtctagtcaatgtctattggt cgttgattcctgatcacattttcaagcttgtaccaaatgtacgtgacattattctttctcataatcgtttatctaaattg aatgaaagtctctttgcaaatgtctcaaaaatacaaaaactatttctagatgttaaccgaattgcgtacgttggacccaa tacttttacagattcactttggaattcactgaaactgctagacttatcaggaaacccttttgtctgtaactgtgacctat tgtggttcagtaaatttttgcggacaaagagatcaaacctctctctccatcaatatccaaggttatacttatgcaattct cctcccgaaaggaaaggcttgatactgaaatctttcacaattactgacgaggactgtcaggcgcctagtaaccttttaac cattctttcgtgcaccggttctgtggtattgttcctcttgataacatcactgatactgtacaaggcaagatggcagatac gatattggttatacctacttcggttcagacggtctgagtatagccgtatcagtgaaattaatttcaaatatgacgctttt gtgatttatgcggatgatgacagcgaattcgttcatgaaactctcatgcagaaacttgaaggggaacatcagatttcact ttgtattcacttcagagatttccaggtagggaaaatcatagccgacaatatcgtggaatgtatgtcggagtgtcgccatg tgcttgtcgtgctatctccgaacttttgtaacagtagatggtgtaaatttgagctggacatcgctcaggatagatggctg aataacgagacggaagccttggttctggttatgttacaggagatcgatagtcggaatatgacgaaatacatgcgtgctat actgaaaacaacaacatacgccatgtggacagacaatcagcaaggacaagaactattctggacacaacttctatctgctt taagctaa |
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Protein
| Protein ID | pfu_aug1.0_1464.1_00726.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1464.1_00726.t1 MHIIIRGVRLTFREDRFVFIHIRKRILAKSAKLKKFDDLKCFNGTSSYLDDVLNIDNPHFDHNKNQIYPPELTLNKSNTN DIAKPFWDLDMKINNGEMKTKIYDKTEDFGFNIVNFPCLMTMFPDCHRTKIPSLSSSAASILQKLTEPLLPKLKVLNLRY NLIHSLYQMKSQCLPSLKRLVLAQNEIHHFPKYAFSSLTIEDLDIGSMKGGVDTVSHNAFDIQTLKKFRFDLNNFKFQIN WPHYAIRGSLRNCTKLEYLDLSYNHLPKWTDGVRALLGELRVLHTLRLVNVYWSLIPDHIFKLVPNVRDIILSHNRLSKL NESLFANVSKIQKLFLDVNRIAYVGPNTFTDSLWNSLKLLDLSGNPFVCNCDLLWFSKFLRTKRSNLSLHQYPRLYLCNS PPERKGLILKSFTITDEDCQAPSNLLTILSCTGSVVLFLLITSLILYKARWQIRYWLYLLRFRRSEYSRISEINFKYDAF VIYADDDSEFVHETLMQKLEGEHQISLCIHFRDFQVGKIIADNIVECMSECRHVLVVLSPNFCNSRWCKFELDIAQDRWL NNETEALVLVMLQEIDSRNMTKYMRAILKTTTYAMWTDNQQGQELFWTQLLSALS |
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