Gene
| Gene Model ID | pfu_aug1.0_1464.1_00727 |
|---|---|
| Locus | scaffold1464.1 : 62296 ... 66191 : + |
| To GenomeBrowser | scaffold1464.1:62296..66191 |
| Genes list of scaffold | scaffold1464.1 |
| Synonym | pfu_aug2.0_221.1_03813 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1464.1_00727.t1 | 7 | 1 | LRR_8 | 2 | 53 | 2.7e-22 | 78.2 | 0.00012 | 0.18 | 11.5 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 1 | LRR_4 | 2 | 40 | 4.8e-17 | 61.1 | 0.0067 | 10.0 | 5.9 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 1 | LRR_7 | 20 | 40 | 1.2e-08 | 33.7 | 0.65 | 970.0 | 0.8 |
| pfu_aug1.0_1464.1_00727.t1 | 2 | 1 | TIR | 36 | 73 | 2.6e-20 | 72.2 | 0.49 | 730.0 | -0.5 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 2 | LRR_4 | 41 | 86 | 4.8e-17 | 61.1 | 8.8e-09 | 1.3e-05 | 24.6 |
| pfu_aug1.0_1464.1_00727.t1 | 5 | 1 | LRR_6 | 41 | 55 | 9.2e-06 | 25.2 | 0.2 | 290.0 | 2.0 |
| pfu_aug1.0_1464.1_00727.t1 | 7 | 2 | LRR_8 | 42 | 104 | 2.7e-22 | 78.2 | 3.4e-10 | 5.1e-07 | 29.3 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 1 | LRR_1 | 42 | 60 | 2.5e-09 | 35.8 | 0.00064 | 0.94 | 9.7 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 2 | LRR_7 | 42 | 57 | 1.2e-08 | 33.7 | 0.00045 | 0.67 | 10.4 |
| pfu_aug1.0_1464.1_00727.t1 | 5 | 2 | LRR_6 | 68 | 81 | 9.2e-06 | 25.2 | 0.0078 | 12.0 | 6.3 |
| pfu_aug1.0_1464.1_00727.t1 | 7 | 3 | LRR_8 | 69 | 124 | 2.7e-22 | 78.2 | 2.3e-10 | 3.4e-07 | 29.8 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 3 | LRR_7 | 69 | 84 | 1.2e-08 | 33.7 | 0.085 | 130.0 | 3.5 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 2 | LRR_1 | 72 | 87 | 2.5e-09 | 35.8 | 0.0041 | 6.1 | 7.2 |
| pfu_aug1.0_1464.1_00727.t1 | 2 | 1 | LRR_5 | 81 | 163 | 1.1e-07 | 31.5 | 9.8e-07 | 0.0015 | 18.2 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 3 | LRR_4 | 93 | 125 | 4.8e-17 | 61.1 | 9.1e-05 | 0.14 | 11.8 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 4 | LRR_7 | 93 | 109 | 1.2e-08 | 33.7 | 0.0048 | 7.2 | 7.2 |
| pfu_aug1.0_1464.1_00727.t1 | 5 | 3 | LRR_6 | 93 | 106 | 9.2e-06 | 25.2 | 0.04 | 59.0 | 4.1 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 3 | LRR_1 | 94 | 116 | 2.5e-09 | 35.8 | 0.00043 | 0.64 | 10.2 |
| pfu_aug1.0_1464.1_00727.t1 | 7 | 4 | LRR_8 | 117 | 181 | 2.7e-22 | 78.2 | 7.7e-08 | 0.00011 | 21.8 |
| pfu_aug1.0_1464.1_00727.t1 | 7 | 5 | LRR_8 | 162 | 203 | 2.7e-22 | 78.2 | 1.6e-07 | 0.00023 | 20.8 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 4 | LRR_4 | 164 | 184 | 4.8e-17 | 61.1 | 6.5e-06 | 0.0097 | 15.5 |
| pfu_aug1.0_1464.1_00727.t1 | 5 | 4 | LRR_6 | 168 | 181 | 9.2e-06 | 25.2 | 5.1e-05 | 0.075 | 13.1 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 5 | LRR_4 | 169 | 203 | 4.8e-17 | 61.1 | 1.8e-06 | 0.0027 | 17.2 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 4 | LRR_1 | 170 | 183 | 2.5e-09 | 35.8 | 9.0e-05 | 0.13 | 12.3 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 5 | LRR_7 | 170 | 181 | 1.2e-08 | 33.7 | 0.0014 | 2.0 | 8.9 |
| pfu_aug1.0_1464.1_00727.t1 | 7 | 6 | LRR_8 | 196 | 241 | 2.7e-22 | 78.2 | 0.0001 | 0.15 | 11.8 |
| pfu_aug1.0_1464.1_00727.t1 | 2 | 2 | LRR_5 | 211 | 266 | 1.1e-07 | 31.5 | 7.6e-05 | 0.11 | 12.1 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 6 | LRR_4 | 221 | 282 | 4.8e-17 | 61.1 | 1.6e-05 | 0.024 | 14.2 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 5 | LRR_1 | 223 | 241 | 2.5e-09 | 35.8 | 0.23 | 340.0 | 1.9 |
| pfu_aug1.0_1464.1_00727.t1 | 7 | 7 | LRR_8 | 245 | 280 | 2.7e-22 | 78.2 | 5.0e-06 | 0.0074 | 16.0 |
| pfu_aug1.0_1464.1_00727.t1 | 5 | 5 | LRR_6 | 270 | 282 | 9.2e-06 | 25.2 | 0.0028 | 4.1 | 7.7 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 6 | LRR_1 | 271 | 284 | 2.5e-09 | 35.8 | 0.00063 | 0.93 | 9.7 |
| pfu_aug1.0_1464.1_00727.t1 | 6 | 6 | LRR_7 | 271 | 283 | 1.2e-08 | 33.7 | 0.0043 | 6.4 | 7.4 |
| pfu_aug1.0_1464.1_00727.t1 | 2 | 2 | TIR | 392 | 525 | 2.6e-20 | 72.2 | 2.6e-23 | 3.8e-20 | 71.7 |
| pfu_aug1.0_1464.1_00727.t1 | 1 | 1 | TIR_2 | 393 | 488 | 2.8e-09 | 37.0 | 4.0e-12 | 5.9e-09 | 35.9 |
Transcript
| Transcript ID | pfu_aug1.0_1464.1_00727.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1464.1_00727.t1 atgtacttatcaaaaaataacttatccatttgtgatagaagtctcgaatccctacacactctgcaacaactatacctcga tatcaacgctataaagaaatgcaagattgataaccttccaaaatctctccgccgtttgaagattgataataatcatctaa cggagttaccacggttttgtgacaatgaatccaaagctattcttccaaaaatgaagtacttaaaccttcaaaataaccaa attcgttatctttatcagtttaaacttgagtgttttccatctctgcaatttcttattttgtctgataacgactttaacag tgtacccggaaatgcgttttctggattgagactacgcgagctgcatttagcaagtatgaaaaagaatatgcaaagaatcg gagaaaatgcatttaacatttcgtccctgcttaaattttatttcagtcaaaatggttttcgatttgattcacatcatttt tccaaggcaactctaagggcctgtaaaaacctagaatatcttgatttatctcataatcatcttccaaaatggactgagga cgtaagatttctcctagagggtttaacacatctacgctatttgatcttgattgaagtatattggtcactaattcctgacc actttttcacattcatcccaaatgttattgaagtgcaactgtccgaaaatcgcatacgtagtttaaaccagagtttattt tcgaaagactcaaggatatcaagattgaccctagacgtgaacagaataacgtatgttggaccgaacacttttcctcagtc actttggaactcattgaagtctctggatttgagtggaaacccttttgtttgcagctgtgatcttctgtggtttagacatt ttcttgacaaaactaccatcagattcaatcaatacccatccaactatcactgtagttcaccgcctgagaagaaaggcctt ccactacaggctttccatcttcgggaagagaactgtcaggcacccagtaaccttttaaccattcttttgtgctctggttc tgttggattgttcctgctgatagtaactcttatcctgtacaaggcaaggtggcaaatacgatattggttatacctgctta gatacagaaggtctgagtatacccgtattagtgatgtaagtttcaagtacgatgcattcatcatctatgctgacgaaaac agtgactttgtccatgatgtgctactcaggaaactagaggtcgagcacgggttttctttgtgtattcacttcagagattt tcaaattggaagaataatagtcgacaatatcgtggaatgtatgtcagaatgtcgcaatgtcctggttatactctctgaag gtttatgtcagagtaaatggtgtaagtttgaattagacgtagcccaagaccgctggcttaataatgagacggaagcatta tttgttataatgatgggtgaagtgaacagtcggtatatgaccaaatacatacatgccttgttgaagacaaccacctatgc agtgtggactgagaatgaagatggaaacgacctattttggaaaaagctcatttctgcaatgaaaattgaggagagttga |
|
Protein
| Protein ID | pfu_aug1.0_1464.1_00727.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1464.1_00727.t1 MYLSKNNLSICDRSLESLHTLQQLYLDINAIKKCKIDNLPKSLRRLKIDNNHLTELPRFCDNESKAILPKMKYLNLQNNQ IRYLYQFKLECFPSLQFLILSDNDFNSVPGNAFSGLRLRELHLASMKKNMQRIGENAFNISSLLKFYFSQNGFRFDSHHF SKATLRACKNLEYLDLSHNHLPKWTEDVRFLLEGLTHLRYLILIEVYWSLIPDHFFTFIPNVIEVQLSENRIRSLNQSLF SKDSRISRLTLDVNRITYVGPNTFPQSLWNSLKSLDLSGNPFVCSCDLLWFRHFLDKTTIRFNQYPSNYHCSSPPEKKGL PLQAFHLREENCQAPSNLLTILLCSGSVGLFLLIVTLILYKARWQIRYWLYLLRYRRSEYTRISDVSFKYDAFIIYADEN SDFVHDVLLRKLEVEHGFSLCIHFRDFQIGRIIVDNIVECMSECRNVLVILSEGLCQSKWCKFELDVAQDRWLNNETEAL FVIMMGEVNSRYMTKYIHALLKTTTYAVWTENEDGNDLFWKKLISAMKIEES |
|